Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nkx6-3Q3UHX8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-3Q3UHX8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nkx6-3Q3UHX8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nkx6-3Q3UHX8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nkx6-3Q3UHX8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Mir1247-201ENSMUST00000116706 82 ntBASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Gm13786-201ENSMUST00000122371 333 ntBASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Gm27501-201ENSMUST00000183599 107 ntBASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Olfr284-202ENSMUST00000206647 966 ntBASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Gm45930-201ENSMUST00000221330 292 ntBASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkx6-3Q3UHX8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Gm15198-201ENSMUST00000117283 177 ntBASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Gm16296-201ENSMUST00000159905 325 ntBASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Gm29396-201ENSMUST00000185659 716 ntBASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Gm24526-201ENSMUST00000082921 158 ntBASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-3Q3UHX8 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms