Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Mup-ps26-201ENSMUST00000121751 202 ntBASIC15.14■□□□□ 0.01
Col5a2Q3U962 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Col5a2Q3U962 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Col5a2Q3U962 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Col5a2Q3U962 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC15.14■□□□□ 0.01
Col5a2Q3U962 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col5a2Q3U962 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col5a2Q3U962 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Col5a2Q3U962 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col5a2Q3U962 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col5a2Q3U962 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC15.14■□□□□ 0.01
Col5a2Q3U962 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col5a2Q3U962 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col5a2Q3U962 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col5a2Q3U962 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC15.14■□□□□ 0.01
Col5a2Q3U962 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC15.14■□□□□ 0.01
Col5a2Q3U962 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC15.13■□□□□ 0.01
Col5a2Q3U962 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Col5a2Q3U962 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Col5a2Q3U962 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Col5a2Q3U962 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Gm5525-201ENSMUST00000190438 1312 ntBASIC15.12■□□□□ 0.01
Col5a2Q3U962 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col5a2Q3U962 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Gm29155-201ENSMUST00000185910 269 ntBASIC15.12■□□□□ 0.01
Col5a2Q3U962 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Gm45398-201ENSMUST00000210561 165 ntBASIC15.12■□□□□ 0.01
Col5a2Q3U962 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Gm17827-201ENSMUST00000211825 742 ntBASIC15.12■□□□□ 0.01
Col5a2Q3U962 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col5a2Q3U962 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.11■□□□□ 0.01
Col5a2Q3U962 Gm9358-201ENSMUST00000183067 927 ntBASIC15.11■□□□□ 0.01
Col5a2Q3U962 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col5a2Q3U962 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col5a2Q3U962 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col5a2Q3U962 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms