Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC8.82□□□□□ -1
Cops9Q3U898 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC8.82□□□□□ -1
Cops9Q3U898 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Gm44401-201ENSMUST00000204462 2375 ntBASIC8.82□□□□□ -1
Cops9Q3U898 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC8.82□□□□□ -1
Cops9Q3U898 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
Cops9Q3U898 Gm6973-201ENSMUST00000117080 721 ntBASIC8.82□□□□□ -1
Cops9Q3U898 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Gm13036-201ENSMUST00000117799 748 ntBASIC8.82□□□□□ -1
Cops9Q3U898 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC8.82□□□□□ -1
Cops9Q3U898 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Gm9630-201ENSMUST00000178304 885 ntBASIC8.82□□□□□ -1
Cops9Q3U898 Gm17807-201ENSMUST00000186869 298 ntBASIC8.82□□□□□ -1
Cops9Q3U898 Gm43347-201ENSMUST00000200226 580 ntBASIC8.82□□□□□ -1
Cops9Q3U898 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC8.82□□□□□ -1
Cops9Q3U898 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Cops9Q3U898 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC8.82□□□□□ -1
Cops9Q3U898 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Gm27177-202ENSMUST00000183514 2703 ntBASIC8.82□□□□□ -1
Cops9Q3U898 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Cops9Q3U898 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC8.82□□□□□ -1
Cops9Q3U898 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC8.82□□□□□ -1
Cops9Q3U898 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC8.82□□□□□ -1
Cops9Q3U898 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Cops9Q3U898 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Cops9Q3U898 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC8.82□□□□□ -1
Cops9Q3U898 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC8.82□□□□□ -1
Cops9Q3U898 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Daam2-202ENSMUST00000224595 1926 ntBASIC8.82□□□□□ -1
Cops9Q3U898 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cops9Q3U898 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
Cops9Q3U898 Gm8798-201ENSMUST00000211877 1661 ntBASIC8.81□□□□□ -1
Cops9Q3U898 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC8.81□□□□□ -1
Cops9Q3U898 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
Cops9Q3U898 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC8.81□□□□□ -1
Cops9Q3U898 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
Cops9Q3U898 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Cops9Q3U898 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Cops9Q3U898 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC8.81□□□□□ -1
Cops9Q3U898 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC8.81□□□□□ -1
Cops9Q3U898 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Gm38225-201ENSMUST00000194001 393 ntBASIC8.81□□□□□ -1
Cops9Q3U898 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC8.81□□□□□ -1
Cops9Q3U898 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC8.81□□□□□ -1
Cops9Q3U898 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms