Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.23□□□□□ -0.61
Q3U1D9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.23□□□□□ -0.61
Q3U1D9 Gm13492-201ENSMUST00000119772 665 ntBASIC11.23□□□□□ -0.61
Q3U1D9 Gm14381-201ENSMUST00000122105 414 ntBASIC11.23□□□□□ -0.61
Q3U1D9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.23□□□□□ -0.61
Q3U1D9 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.23□□□□□ -0.61
Q3U1D9 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.23□□□□□ -0.61
Q3U1D9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.23□□□□□ -0.61
Q3U1D9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.23□□□□□ -0.61
Q3U1D9 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Q3U1D9 Gm43758-201ENSMUST00000199500 367 ntBASIC11.23□□□□□ -0.61
Q3U1D9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Gm6334-201ENSMUST00000207083 228 ntBASIC11.23□□□□□ -0.61
Q3U1D9 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Gm45865-201ENSMUST00000211815 945 ntBASIC11.23□□□□□ -0.61
Q3U1D9 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.23□□□□□ -0.61
Q3U1D9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Q3U1D9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Q3U1D9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Q3U1D9 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.23□□□□□ -0.61
Q3U1D9 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.23□□□□□ -0.61
Q3U1D9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Q3U1D9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.23□□□□□ -0.61
Q3U1D9 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
Q3U1D9 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Q3U1D9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Q3U1D9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Q3U1D9 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.22□□□□□ -0.61
Q3U1D9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Q3U1D9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.22□□□□□ -0.61
Q3U1D9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Q3U1D9 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Q3U1D9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Q3U1D9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Q3U1D9 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Gm7584-201ENSMUST00000175829 940 ntBASIC11.22□□□□□ -0.61
Q3U1D9 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Gm27320-201ENSMUST00000184892 109 ntBASIC11.22□□□□□ -0.61
Q3U1D9 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.22□□□□□ -0.61
Q3U1D9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.22□□□□□ -0.61
Q3U1D9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.22□□□□□ -0.61
Q3U1D9 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.22□□□□□ -0.61
Q3U1D9 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.22□□□□□ -0.61
Q3U1D9 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.22□□□□□ -0.61
Q3U1D9 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.22□□□□□ -0.61
Q3U1D9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Q3U1D9 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Q3U1D9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Q3U1D9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.22□□□□□ -0.61
Q3U1D9 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Q3U1D9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Q3U1D9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Q3U1D9 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.21□□□□□ -0.61
Q3U1D9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Q3U1D9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Q3U1D9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Q3U1D9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.21□□□□□ -0.61
Q3U1D9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.21□□□□□ -0.61
Q3U1D9 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Q3U1D9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms