Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Gm5279-201ENSMUST00000199575 745 ntBASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Gm44855-201ENSMUST00000205725 362 ntBASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Fndc4Q3TR08 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Fndc4Q3TR08 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
Fndc4Q3TR08 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Fndc4Q3TR08 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.02□□□□□ -0.64
Fndc4Q3TR08 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Fndc4Q3TR08 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.02□□□□□ -0.64
Fndc4Q3TR08 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Fndc4Q3TR08 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.02□□□□□ -0.64
Fndc4Q3TR08 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Fndc4Q3TR08 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
Fndc4Q3TR08 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
Fndc4Q3TR08 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Fndc4Q3TR08 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.02□□□□□ -0.64
Fndc4Q3TR08 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Fndc4Q3TR08 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Fndc4Q3TR08 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Fndc4Q3TR08 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Fndc4Q3TR08 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fndc4Q3TR08 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms