Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Gm19078-201ENSMUST00000206311 727 ntBASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.72□□□□□ -0.21
Trim43aQ3TL54 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.71□□□□□ -0.21
Trim43aQ3TL54 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43aQ3TL54 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.71□□□□□ -0.22
Trim43aQ3TL54 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43aQ3TL54 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43aQ3TL54 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43aQ3TL54 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43aQ3TL54 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.71□□□□□ -0.22
Trim43aQ3TL54 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Gm11524-201ENSMUST00000119349 807 ntBASIC13.7□□□□□ -0.22
Trim43aQ3TL54 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms