Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim7Q3TJD7 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.42□□□□□ -0.1
Pdlim7Q3TJD7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Ntng1-201ENSMUST00000051253 327 ntBASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim7Q3TJD7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim7Q3TJD7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Gm12380-201ENSMUST00000119012 544 ntBASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Gm14999-201ENSMUST00000121039 624 ntBASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Gm8018-201ENSMUST00000173536 789 ntBASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Gm45598-202ENSMUST00000210719 986 ntBASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.39□□□□□ -0.11
Pdlim7Q3TJD7 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms