Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.55□□□□□ -0.4
Usp39Q3TIX9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.55□□□□□ -0.4
Usp39Q3TIX9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Gm38223-201ENSMUST00000194484 695 ntBASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Gm5356-201ENSMUST00000093326 615 ntBASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp39Q3TIX9 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Gm13689-201ENSMUST00000119360 685 ntBASIC12.54□□□□□ -0.4
Usp39Q3TIX9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 AY702102-202ENSMUST00000194651 1173 ntBASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.54□□□□□ -0.4
Usp39Q3TIX9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.54□□□□□ -0.4
Usp39Q3TIX9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp39Q3TIX9 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Gm12341-201ENSMUST00000119724 503 ntBASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Gm27892-201ENSMUST00000185017 106 ntBASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.53□□□□□ -0.4
Usp39Q3TIX9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.53□□□□□ -0.4
Usp39Q3TIX9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp39Q3TIX9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms