Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim63Q38HM4 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim63Q38HM4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trim63Q38HM4 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.59□□□□□ -0.71
Trim63Q38HM4 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trim63Q38HM4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim63Q38HM4 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim63Q38HM4 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim63Q38HM4 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim63Q38HM4 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim63Q38HM4 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim63Q38HM4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.71
Trim63Q38HM4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.58□□□□□ -0.72
Trim63Q38HM4 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.58□□□□□ -0.72
Trim63Q38HM4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.58□□□□□ -0.72
Trim63Q38HM4 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trim63Q38HM4 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.57□□□□□ -0.72
Trim63Q38HM4 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.57□□□□□ -0.72
Trim63Q38HM4 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Gm15678-201ENSMUST00000117573 960 ntBASIC10.57□□□□□ -0.72
Trim63Q38HM4 Gm29741-201ENSMUST00000192667 421 ntBASIC10.57□□□□□ -0.72
Trim63Q38HM4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC10.57□□□□□ -0.72
Trim63Q38HM4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim63Q38HM4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms