Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Mir877-201ENSMUST00000104738 85 ntBASIC12.39□□□□□ -0.43
Hoxc4Q08624 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Hoxc4Q08624 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.39□□□□□ -0.43
Hoxc4Q08624 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc4Q08624 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.38□□□□□ -0.43
Hoxc4Q08624 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Gm25214-201ENSMUST00000104573 129 ntBASIC12.38□□□□□ -0.43
Hoxc4Q08624 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Gm15236-201ENSMUST00000117309 379 ntBASIC12.38□□□□□ -0.43
Hoxc4Q08624 Gm11930-201ENSMUST00000117788 190 ntBASIC12.38□□□□□ -0.43
Hoxc4Q08624 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Hoxc4Q08624 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.38□□□□□ -0.43
Hoxc4Q08624 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Gm37201-201ENSMUST00000191845 523 ntBASIC12.38□□□□□ -0.43
Hoxc4Q08624 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.38□□□□□ -0.43
Hoxc4Q08624 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.38□□□□□ -0.43
Hoxc4Q08624 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc4Q08624 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc4Q08624 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc4Q08624 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.37□□□□□ -0.43
Hoxc4Q08624 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Hoxc4Q08624 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.37□□□□□ -0.43
Hoxc4Q08624 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.37□□□□□ -0.43
Hoxc4Q08624 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc4Q08624 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc4Q08624 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc4Q08624 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc4Q08624 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hoxc4Q08624 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hoxc4Q08624 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc4Q08624 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.37□□□□□ -0.43
Hoxc4Q08624 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.37□□□□□ -0.43
Hoxc4Q08624 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc4Q08624 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.37□□□□□ -0.43
Hoxc4Q08624 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms