Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
Col9a2Q07643 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.97□□□□□ -0.17
Col9a2Q07643 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a2Q07643 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col9a2Q07643 Gm14381-201ENSMUST00000122105 414 ntBASIC13.97□□□□□ -0.17
Col9a2Q07643 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.97□□□□□ -0.17
Col9a2Q07643 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.97□□□□□ -0.17
Col9a2Q07643 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col9a2Q07643 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a2Q07643 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a2Q07643 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col9a2Q07643 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a2Q07643 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a2Q07643 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Col9a2Q07643 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a2Q07643 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a2Q07643 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Col9a2Q07643 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a2Q07643 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.97□□□□□ -0.17
Col9a2Q07643 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a2Q07643 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a2Q07643 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a2Q07643 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a2Q07643 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col9a2Q07643 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a2Q07643 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a2Q07643 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a2Q07643 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a2Q07643 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a2Q07643 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a2Q07643 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a2Q07643 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a2Q07643 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a2Q07643 Mir877-201ENSMUST00000104738 85 ntBASIC13.96□□□□□ -0.17
Col9a2Q07643 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a2Q07643 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.96□□□□□ -0.17
Col9a2Q07643 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Col9a2Q07643 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a2Q07643 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a2Q07643 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a2Q07643 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.96□□□□□ -0.17
Col9a2Q07643 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.96□□□□□ -0.17
Col9a2Q07643 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.96□□□□□ -0.17
Col9a2Q07643 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.96□□□□□ -0.17
Col9a2Q07643 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.96□□□□□ -0.17
Col9a2Q07643 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.96□□□□□ -0.17
Col9a2Q07643 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a2Q07643 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.96□□□□□ -0.17
Col9a2Q07643 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a2Q07643 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.96□□□□□ -0.17
Col9a2Q07643 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.96□□□□□ -0.17
Col9a2Q07643 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a2Q07643 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col9a2Q07643 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col9a2Q07643 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col9a2Q07643 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col9a2Q07643 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col9a2Q07643 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col9a2Q07643 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col9a2Q07643 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Col9a2Q07643 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.95□□□□□ -0.18
Col9a2Q07643 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col9a2Q07643 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.95□□□□□ -0.18
Col9a2Q07643 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.95□□□□□ -0.18
Col9a2Q07643 Gm25043-201ENSMUST00000158604 212 ntBASIC13.95□□□□□ -0.18
Col9a2Q07643 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.95□□□□□ -0.18
Col9a2Q07643 Gm29199-201ENSMUST00000187766 775 ntBASIC13.95□□□□□ -0.18
Col9a2Q07643 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.95□□□□□ -0.18
Col9a2Q07643 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.95□□□□□ -0.18
Col9a2Q07643 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.95□□□□□ -0.18
Col9a2Q07643 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col9a2Q07643 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Col9a2Q07643 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.95□□□□□ -0.18
Col9a2Q07643 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Col9a2Q07643 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col9a2Q07643 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col9a2Q07643 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col9a2Q07643 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms