Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm9797-202ENSMUST00000218003 294 ntBASIC19.38■□□□□ 0.69
Col17a1Q07563 Rps3a2-201ENSMUST00000074245 792 ntBASIC19.38■□□□□ 0.69
Col17a1Q07563 Rps3a3-201ENSMUST00000074680 795 ntBASIC19.38■□□□□ 0.69
Col17a1Q07563 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Col17a1Q07563 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Col17a1Q07563 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col17a1Q07563 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Col17a1Q07563 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col17a1Q07563 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col17a1Q07563 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.37■□□□□ 0.69
Col17a1Q07563 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC19.37■□□□□ 0.69
Col17a1Q07563 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Col17a1Q07563 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Col17a1Q07563 Gm12663-201ENSMUST00000118481 958 ntBASIC19.37■□□□□ 0.69
Col17a1Q07563 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Mir432-201ENSMUST00000157230 75 ntBASIC19.37■□□□□ 0.69
Col17a1Q07563 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Col17a1Q07563 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Col17a1Q07563 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col17a1Q07563 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.37■□□□□ 0.69
Col17a1Q07563 AC162938.1-201ENSMUST00000213140 2323 ntBASIC19.36■□□□□ 0.69
Col17a1Q07563 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Col17a1Q07563 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 Gm14892-201ENSMUST00000117636 267 ntBASIC19.36■□□□□ 0.69
Col17a1Q07563 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC19.36■□□□□ 0.69
Col17a1Q07563 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC19.36■□□□□ 0.69
Col17a1Q07563 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC19.36■□□□□ 0.69
Col17a1Q07563 Gm7082-201ENSMUST00000209880 969 ntBASIC19.36■□□□□ 0.69
Col17a1Q07563 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Col17a1Q07563 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 Gm13142-201ENSMUST00000117213 1453 ntBASIC19.36■□□□□ 0.69
Col17a1Q07563 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
Col17a1Q07563 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col17a1Q07563 Gm23604-201ENSMUST00000104311 132 ntBASIC19.35■□□□□ 0.69
Col17a1Q07563 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC19.35■□□□□ 0.69
Col17a1Q07563 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC19.35■□□□□ 0.69
Col17a1Q07563 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC19.35■□□□□ 0.69
Col17a1Q07563 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Col17a1Q07563 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col17a1Q07563 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col17a1Q07563 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col17a1Q07563 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
Col17a1Q07563 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col17a1Q07563 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Col17a1Q07563 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Col17a1Q07563 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col17a1Q07563 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col17a1Q07563 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col17a1Q07563 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col17a1Q07563 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col17a1Q07563 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col17a1Q07563 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Col17a1Q07563 Gm18798-201ENSMUST00000187264 1700 ntBASIC19.35■□□□□ 0.69
Col17a1Q07563 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col17a1Q07563 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
Col17a1Q07563 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col17a1Q07563 Gm23400-201ENSMUST00000174994 102 ntBASIC19.35■□□□□ 0.69
Col17a1Q07563 Gm26463-201ENSMUST00000175065 101 ntBASIC19.35■□□□□ 0.69
Col17a1Q07563 Gm24332-201ENSMUST00000175102 102 ntBASIC19.35■□□□□ 0.69
Col17a1Q07563 Gm25959-201ENSMUST00000175112 102 ntBASIC19.35■□□□□ 0.69
Col17a1Q07563 Gm22475-201ENSMUST00000175169 102 ntBASIC19.35■□□□□ 0.69
Col17a1Q07563 Gm22903-201ENSMUST00000175193 102 ntBASIC19.35■□□□□ 0.69
Col17a1Q07563 Gm25070-201ENSMUST00000175237 102 ntBASIC19.35■□□□□ 0.69
Col17a1Q07563 Gm24159-201ENSMUST00000175264 102 ntBASIC19.35■□□□□ 0.69
Col17a1Q07563 Gm25299-201ENSMUST00000175283 102 ntBASIC19.35■□□□□ 0.69
Col17a1Q07563 Gm23798-201ENSMUST00000175560 102 ntBASIC19.35■□□□□ 0.69
Col17a1Q07563 Gm23802-201ENSMUST00000175565 102 ntBASIC19.35■□□□□ 0.69
Col17a1Q07563 Gm25708-201ENSMUST00000177687 102 ntBASIC19.35■□□□□ 0.69
Col17a1Q07563 Gm24370-201ENSMUST00000178007 102 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms