Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Msx2Q03358 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Msx2Q03358 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.54□□□□□ -0.4
Msx2Q03358 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx2Q03358 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx2Q03358 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Msx2Q03358 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Msx2Q03358 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.53□□□□□ -0.4
Msx2Q03358 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Msx2Q03358 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Msx2Q03358 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Msx2Q03358 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.53□□□□□ -0.4
Msx2Q03358 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.53□□□□□ -0.4
Msx2Q03358 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Msx2Q03358 Gm25144-201ENSMUST00000179561 110 ntBASIC12.53□□□□□ -0.4
Msx2Q03358 Gm25352-201ENSMUST00000179815 110 ntBASIC12.53□□□□□ -0.4
Msx2Q03358 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.53□□□□□ -0.4
Msx2Q03358 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.53□□□□□ -0.4
Msx2Q03358 Gm6888-201ENSMUST00000221983 706 ntBASIC12.53□□□□□ -0.4
Msx2Q03358 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.53□□□□□ -0.4
Msx2Q03358 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC12.53□□□□□ -0.4
Msx2Q03358 Gm24447-201ENSMUST00000083977 338 ntBASIC12.53□□□□□ -0.4
Msx2Q03358 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Msx2Q03358 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Msx2Q03358 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.53□□□□□ -0.4
Msx2Q03358 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx2Q03358 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Msx2Q03358 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Msx2Q03358 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Msx2Q03358 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Msx2Q03358 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Msx2Q03358 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Msx2Q03358 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Msx2Q03358 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Msx2Q03358 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Msx2Q03358 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Msx2Q03358 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Msx2Q03358 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Msx2Q03358 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Msx2Q03358 Gm27321-201ENSMUST00000185021 205 ntBASIC12.52□□□□□ -0.41
Msx2Q03358 Gm19891-201ENSMUST00000189771 303 ntBASIC12.52□□□□□ -0.41
Msx2Q03358 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Msx2Q03358 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.52□□□□□ -0.41
Msx2Q03358 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.52□□□□□ -0.41
Msx2Q03358 Gm44771-201ENSMUST00000206975 626 ntBASIC12.52□□□□□ -0.41
Msx2Q03358 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Msx2Q03358 Gm5161-201ENSMUST00000075243 853 ntBASIC12.52□□□□□ -0.41
Msx2Q03358 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Msx2Q03358 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.52□□□□□ -0.41
Msx2Q03358 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms