Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GabpaQ00422 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.63□□□□□ -0.07
GabpaQ00422 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GabpaQ00422 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GabpaQ00422 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GabpaQ00422 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GabpaQ00422 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
GabpaQ00422 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GabpaQ00422 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.63□□□□□ -0.07
GabpaQ00422 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GabpaQ00422 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.62□□□□□ -0.07
GabpaQ00422 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
GabpaQ00422 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.62□□□□□ -0.07
GabpaQ00422 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.62□□□□□ -0.07
GabpaQ00422 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.62□□□□□ -0.07
GabpaQ00422 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
GabpaQ00422 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
GabpaQ00422 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
GabpaQ00422 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Gm18827-201ENSMUST00000188341 790 ntBASIC14.62□□□□□ -0.07
GabpaQ00422 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
GabpaQ00422 Gm37466-201ENSMUST00000195692 652 ntBASIC14.62□□□□□ -0.07
GabpaQ00422 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.62□□□□□ -0.07
GabpaQ00422 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.62□□□□□ -0.07
GabpaQ00422 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
GabpaQ00422 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
GabpaQ00422 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.62□□□□□ -0.07
GabpaQ00422 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.62□□□□□ -0.07
GabpaQ00422 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.62□□□□□ -0.07
GabpaQ00422 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.62□□□□□ -0.07
GabpaQ00422 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.62□□□□□ -0.07
GabpaQ00422 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.62□□□□□ -0.07
GabpaQ00422 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GabpaQ00422 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
GabpaQ00422 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
GabpaQ00422 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
GabpaQ00422 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
GabpaQ00422 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.61□□□□□ -0.07
GabpaQ00422 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
GabpaQ00422 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.61□□□□□ -0.07
GabpaQ00422 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
GabpaQ00422 Gm2383-201ENSMUST00000181461 807 ntBASIC14.61□□□□□ -0.07
GabpaQ00422 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.61□□□□□ -0.07
GabpaQ00422 Gm8885-201ENSMUST00000189382 598 ntBASIC14.61□□□□□ -0.07
GabpaQ00422 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
GabpaQ00422 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.61□□□□□ -0.07
GabpaQ00422 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.61□□□□□ -0.07
GabpaQ00422 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.61□□□□□ -0.07
GabpaQ00422 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
GabpaQ00422 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
GabpaQ00422 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.61□□□□□ -0.07
GabpaQ00422 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GabpaQ00422 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms