Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.08□□□□□ -0.64
Smn1P97801 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.08□□□□□ -0.64
Smn1P97801 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smn1P97801 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smn1P97801 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smn1P97801 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smn1P97801 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smn1P97801 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Smn1P97801 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Smn1P97801 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Smn1P97801 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Smn1P97801 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Smn1P97801 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.07□□□□□ -0.64
Smn1P97801 Gm14701-201ENSMUST00000117156 348 ntBASIC11.07□□□□□ -0.64
Smn1P97801 Gm13223-201ENSMUST00000118609 747 ntBASIC11.07□□□□□ -0.64
Smn1P97801 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Smn1P97801 Gm15376-201ENSMUST00000122258 783 ntBASIC11.07□□□□□ -0.64
Smn1P97801 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.07□□□□□ -0.64
Smn1P97801 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Smn1P97801 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.07□□□□□ -0.64
Smn1P97801 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.07□□□□□ -0.64
Smn1P97801 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.07□□□□□ -0.64
Smn1P97801 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Smn1P97801 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.07□□□□□ -0.64
Smn1P97801 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Smn1P97801 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Smn1P97801 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smn1P97801 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Smn1P97801 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.07□□□□□ -0.64
Smn1P97801 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Smn1P97801 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Smn1P97801 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Smn1P97801 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.06□□□□□ -0.64
Smn1P97801 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.06□□□□□ -0.64
Smn1P97801 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.06□□□□□ -0.64
Smn1P97801 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.06□□□□□ -0.64
Smn1P97801 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.06□□□□□ -0.64
Smn1P97801 Gm9522-201ENSMUST00000182394 926 ntBASIC11.06□□□□□ -0.64
Smn1P97801 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC11.06□□□□□ -0.64
Smn1P97801 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Gm2756-201ENSMUST00000195851 400 ntBASIC11.06□□□□□ -0.64
Smn1P97801 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.06□□□□□ -0.64
Smn1P97801 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.06□□□□□ -0.64
Smn1P97801 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.06□□□□□ -0.64
Smn1P97801 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.06□□□□□ -0.64
Smn1P97801 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms