Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lig3P97386 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Lig3P97386 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.15□□□□□ -0.14
Lig3P97386 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Gm37259-201ENSMUST00000193903 849 ntBASIC14.15□□□□□ -0.14
Lig3P97386 Olfr284-202ENSMUST00000206647 966 ntBASIC14.15□□□□□ -0.14
Lig3P97386 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.15□□□□□ -0.14
Lig3P97386 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.15□□□□□ -0.14
Lig3P97386 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Lig3P97386 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.15□□□□□ -0.15
Lig3P97386 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Lig3P97386 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.14□□□□□ -0.15
Lig3P97386 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Gm12203-201ENSMUST00000118235 598 ntBASIC14.14□□□□□ -0.15
Lig3P97386 Gm12241-201ENSMUST00000118330 726 ntBASIC14.14□□□□□ -0.15
Lig3P97386 Gm12209-201ENSMUST00000120089 596 ntBASIC14.14□□□□□ -0.15
Lig3P97386 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Lig3P97386 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.14□□□□□ -0.15
Lig3P97386 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.14□□□□□ -0.15
Lig3P97386 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.14□□□□□ -0.15
Lig3P97386 Gm45865-201ENSMUST00000211815 945 ntBASIC14.14□□□□□ -0.15
Lig3P97386 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.14□□□□□ -0.15
Lig3P97386 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.14□□□□□ -0.15
Lig3P97386 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Lig3P97386 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Lig3P97386 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.14□□□□□ -0.15
Lig3P97386 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.14□□□□□ -0.15
Lig3P97386 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lig3P97386 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Lig3P97386 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lig3P97386 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lig3P97386 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lig3P97386 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lig3P97386 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lig3P97386 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.13□□□□□ -0.15
Lig3P97386 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lig3P97386 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Lig3P97386 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lig3P97386 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lig3P97386 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lig3P97386 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.13□□□□□ -0.15
Lig3P97386 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.13□□□□□ -0.15
Lig3P97386 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.13□□□□□ -0.15
Lig3P97386 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.13□□□□□ -0.15
Lig3P97386 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.13□□□□□ -0.15
Lig3P97386 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lig3P97386 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.13□□□□□ -0.15
Lig3P97386 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lig3P97386 Gm6334-201ENSMUST00000207083 228 ntBASIC14.13□□□□□ -0.15
Lig3P97386 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.13□□□□□ -0.15
Lig3P97386 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.13□□□□□ -0.15
Lig3P97386 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lig3P97386 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Lig3P97386 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lig3P97386 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lig3P97386 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lig3P97386 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lig3P97386 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lig3P97386 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.13□□□□□ -0.15
Lig3P97386 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms