Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.84□□□□□ -0.67
SgcaP82350 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Gm6912-201ENSMUST00000117218 544 ntBASIC10.84□□□□□ -0.67
SgcaP82350 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Gm11779-201ENSMUST00000118541 368 ntBASIC10.84□□□□□ -0.67
SgcaP82350 Gm14494-201ENSMUST00000118786 435 ntBASIC10.84□□□□□ -0.67
SgcaP82350 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.84□□□□□ -0.67
SgcaP82350 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.84□□□□□ -0.67
SgcaP82350 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC10.84□□□□□ -0.67
SgcaP82350 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SgcaP82350 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.84□□□□□ -0.67
SgcaP82350 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
SgcaP82350 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
SgcaP82350 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.84□□□□□ -0.67
SgcaP82350 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.84□□□□□ -0.67
SgcaP82350 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
SgcaP82350 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SgcaP82350 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
SgcaP82350 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.83□□□□□ -0.68
SgcaP82350 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.83□□□□□ -0.68
SgcaP82350 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.83□□□□□ -0.68
SgcaP82350 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.83□□□□□ -0.68
SgcaP82350 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.83□□□□□ -0.68
SgcaP82350 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.83□□□□□ -0.68
SgcaP82350 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.83□□□□□ -0.68
SgcaP82350 Gm4804-201ENSMUST00000182234 999 ntBASIC10.83□□□□□ -0.68
SgcaP82350 Gm8000-201ENSMUST00000188378 592 ntBASIC10.83□□□□□ -0.68
SgcaP82350 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
SgcaP82350 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.83□□□□□ -0.68
SgcaP82350 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcaP82350 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.82□□□□□ -0.68
SgcaP82350 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.82□□□□□ -0.68
SgcaP82350 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SgcaP82350 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.82□□□□□ -0.68
SgcaP82350 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SgcaP82350 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcaP82350 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.82□□□□□ -0.68
SgcaP82350 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms