Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.55□□□□□ -0.56
SgcbP82349 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.55□□□□□ -0.56
SgcbP82349 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
SgcbP82349 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.55□□□□□ -0.56
SgcbP82349 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
SgcbP82349 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.55□□□□□ -0.56
SgcbP82349 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.55□□□□□ -0.56
SgcbP82349 AY702102-202ENSMUST00000194651 1173 ntBASIC11.55□□□□□ -0.56
SgcbP82349 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.55□□□□□ -0.56
SgcbP82349 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.55□□□□□ -0.56
SgcbP82349 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.55□□□□□ -0.56
SgcbP82349 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.55□□□□□ -0.56
SgcbP82349 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.55□□□□□ -0.56
SgcbP82349 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SgcbP82349 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
SgcbP82349 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
SgcbP82349 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
SgcbP82349 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
SgcbP82349 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.55□□□□□ -0.56
SgcbP82349 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.55□□□□□ -0.56
SgcbP82349 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
SgcbP82349 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcbP82349 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.54□□□□□ -0.56
SgcbP82349 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.54□□□□□ -0.56
SgcbP82349 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SgcbP82349 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SgcbP82349 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.54□□□□□ -0.56
SgcbP82349 Gm11637-201ENSMUST00000120601 592 ntBASIC11.54□□□□□ -0.56
SgcbP82349 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Gm11978-201ENSMUST00000122315 466 ntBASIC11.54□□□□□ -0.56
SgcbP82349 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Snora78-201ENSMUST00000158630 128 ntBASIC11.54□□□□□ -0.56
SgcbP82349 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.54□□□□□ -0.56
SgcbP82349 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.54□□□□□ -0.56
SgcbP82349 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.54□□□□□ -0.56
SgcbP82349 CT009764.1-201ENSMUST00000222260 483 ntBASIC11.54□□□□□ -0.56
SgcbP82349 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.54□□□□□ -0.56
SgcbP82349 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.54□□□□□ -0.56
SgcbP82349 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.54□□□□□ -0.56
SgcbP82349 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
SgcbP82349 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Matn2-206ENSMUST00000228570 2798 ntBASIC11.54□□□□□ -0.56
SgcbP82349 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcbP82349 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcbP82349 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcbP82349 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcbP82349 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcbP82349 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcbP82349 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.53□□□□□ -0.56
SgcbP82349 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcbP82349 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcbP82349 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.53□□□□□ -0.56
SgcbP82349 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
SgcbP82349 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcbP82349 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcbP82349 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SgcbP82349 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SgcbP82349 Mir686-201ENSMUST00000102174 109 ntBASIC11.53□□□□□ -0.56
SgcbP82349 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcbP82349 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.53□□□□□ -0.56
SgcbP82349 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms