Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CiitaP79621 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14□□□□□ -0.17
CiitaP79621 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CiitaP79621 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CiitaP79621 Daam2-202ENSMUST00000224595 1926 ntBASIC14□□□□□ -0.17
CiitaP79621 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CiitaP79621 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
CiitaP79621 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CiitaP79621 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CiitaP79621 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.99□□□□□ -0.17
CiitaP79621 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CiitaP79621 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CiitaP79621 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CiitaP79621 Gm22323-201ENSMUST00000103832 109 ntBASIC13.99□□□□□ -0.17
CiitaP79621 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CiitaP79621 Gm13813-201ENSMUST00000120998 787 ntBASIC13.99□□□□□ -0.17
CiitaP79621 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.99□□□□□ -0.17
CiitaP79621 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CiitaP79621 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CiitaP79621 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.99□□□□□ -0.17
CiitaP79621 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.99□□□□□ -0.17
CiitaP79621 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.99□□□□□ -0.17
CiitaP79621 Gm24526-201ENSMUST00000082921 158 ntBASIC13.99□□□□□ -0.17
CiitaP79621 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CiitaP79621 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.99□□□□□ -0.17
CiitaP79621 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CiitaP79621 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.99□□□□□ -0.17
CiitaP79621 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CiitaP79621 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CiitaP79621 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CiitaP79621 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CiitaP79621 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CiitaP79621 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CiitaP79621 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CiitaP79621 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
CiitaP79621 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CiitaP79621 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.98□□□□□ -0.17
CiitaP79621 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.98□□□□□ -0.17
CiitaP79621 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.98□□□□□ -0.17
CiitaP79621 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.98□□□□□ -0.17
CiitaP79621 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.98□□□□□ -0.17
CiitaP79621 Gm37489-201ENSMUST00000191883 159 ntBASIC13.98□□□□□ -0.17
CiitaP79621 Gm38341-201ENSMUST00000195357 515 ntBASIC13.98□□□□□ -0.17
CiitaP79621 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.98□□□□□ -0.17
CiitaP79621 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.98□□□□□ -0.17
CiitaP79621 Gm21769-201ENSMUST00000211922 111 ntBASIC13.98□□□□□ -0.17
CiitaP79621 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.98□□□□□ -0.17
CiitaP79621 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.98□□□□□ -0.17
CiitaP79621 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CiitaP79621 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CiitaP79621 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.98□□□□□ -0.17
CiitaP79621 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CiitaP79621 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.97□□□□□ -0.17
CiitaP79621 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
CiitaP79621 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CiitaP79621 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CiitaP79621 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CiitaP79621 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CiitaP79621 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CiitaP79621 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CiitaP79621 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.97□□□□□ -0.17
CiitaP79621 Gm13492-201ENSMUST00000119772 665 ntBASIC13.97□□□□□ -0.17
CiitaP79621 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.97□□□□□ -0.17
CiitaP79621 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms