Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb1P63158 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.24□□□□□ -0.13
Hmgb1P63158 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hmgb1P63158 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Mir686-201ENSMUST00000102174 109 ntBASIC14.24□□□□□ -0.13
Hmgb1P63158 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.24□□□□□ -0.13
Hmgb1P63158 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Hmgb1P63158 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Gm27437-201ENSMUST00000183429 107 ntBASIC14.24□□□□□ -0.13
Hmgb1P63158 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.24□□□□□ -0.13
Hmgb1P63158 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hmgb1P63158 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hmgb1P63158 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hmgb1P63158 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.24□□□□□ -0.13
Hmgb1P63158 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hmgb1P63158 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgb1P63158 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.23□□□□□ -0.13
Hmgb1P63158 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hmgb1P63158 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.23□□□□□ -0.13
Hmgb1P63158 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.23□□□□□ -0.13
Hmgb1P63158 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.23□□□□□ -0.13
Hmgb1P63158 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hmgb1P63158 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.23□□□□□ -0.13
Hmgb1P63158 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.23□□□□□ -0.13
Hmgb1P63158 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.23□□□□□ -0.13
Hmgb1P63158 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.23□□□□□ -0.13
Hmgb1P63158 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.23□□□□□ -0.13
Hmgb1P63158 Gm6458-201ENSMUST00000211573 635 ntBASIC14.23□□□□□ -0.13
Hmgb1P63158 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.23□□□□□ -0.13
Hmgb1P63158 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.23□□□□□ -0.13
Hmgb1P63158 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Hmgb1P63158 Gm9544-201ENSMUST00000223349 2482 ntBASIC14.23□□□□□ -0.13
Hmgb1P63158 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgb1P63158 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.23□□□□□ -0.13
Hmgb1P63158 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Hmgb1P63158 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Hmgb1P63158 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hmgb1P63158 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgb1P63158 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Hmgb1P63158 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hmgb1P63158 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hmgb1P63158 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.22□□□□□ -0.13
Hmgb1P63158 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.22□□□□□ -0.13
Hmgb1P63158 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hmgb1P63158 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms