Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.69□□□□□ -0.38
Lhx1P63006 Mospd4-201ENSMUST00000180618 576 ntBASIC12.69□□□□□ -0.38
Lhx1P63006 Gm27501-201ENSMUST00000183599 107 ntBASIC12.69□□□□□ -0.38
Lhx1P63006 Gm29396-201ENSMUST00000185659 716 ntBASIC12.69□□□□□ -0.38
Lhx1P63006 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lhx1P63006 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.69□□□□□ -0.38
Lhx1P63006 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lhx1P63006 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx1P63006 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.69□□□□□ -0.38
Lhx1P63006 Gm5904-201ENSMUST00000210286 865 ntBASIC12.69□□□□□ -0.38
Lhx1P63006 Gm18935-201ENSMUST00000212692 664 ntBASIC12.69□□□□□ -0.38
Lhx1P63006 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx1P63006 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx1P63006 Gm24526-201ENSMUST00000082921 158 ntBASIC12.69□□□□□ -0.38
Lhx1P63006 Mir339-201ENSMUST00000083659 96 ntBASIC12.69□□□□□ -0.38
Lhx1P63006 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx1P63006 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx1P63006 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lhx1P63006 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx1P63006 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx1P63006 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lhx1P63006 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Lhx1P63006 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx1P63006 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Lhx1P63006 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx1P63006 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx1P63006 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx1P63006 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.69□□□□□ -0.38
Lhx1P63006 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx1P63006 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx1P63006 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lhx1P63006 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx1P63006 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Lhx1P63006 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.68□□□□□ -0.38
Lhx1P63006 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.68□□□□□ -0.38
Lhx1P63006 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Lhx1P63006 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Lhx1P63006 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.68□□□□□ -0.38
Lhx1P63006 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Gm10434-201ENSMUST00000101158 471 ntBASIC12.68□□□□□ -0.38
Lhx1P63006 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Gm15198-201ENSMUST00000117283 177 ntBASIC12.68□□□□□ -0.38
Lhx1P63006 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Gm13786-201ENSMUST00000122371 333 ntBASIC12.68□□□□□ -0.38
Lhx1P63006 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.68□□□□□ -0.38
Lhx1P63006 Gm38266-201ENSMUST00000194931 421 ntBASIC12.68□□□□□ -0.38
Lhx1P63006 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.68□□□□□ -0.38
Lhx1P63006 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Lhx1P63006 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Lhx1P63006 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Lhx1P63006 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx1P63006 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.68□□□□□ -0.38
Lhx1P63006 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx1P63006 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx1P63006 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx1P63006 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx1P63006 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Lhx1P63006 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx1P63006 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx1P63006 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Lhx1P63006 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx1P63006 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.67□□□□□ -0.38
Lhx1P63006 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx1P63006 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Lhx1P63006 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx1P63006 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Lhx1P63006 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx1P63006 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx1P63006 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx1P63006 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.67□□□□□ -0.38
Lhx1P63006 Gm13813-201ENSMUST00000120998 787 ntBASIC12.67□□□□□ -0.38
Lhx1P63006 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx1P63006 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx1P63006 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.67□□□□□ -0.38
Lhx1P63006 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.67□□□□□ -0.38
Lhx1P63006 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.67□□□□□ -0.38
Lhx1P63006 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.67□□□□□ -0.38
Lhx1P63006 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.67□□□□□ -0.38
Lhx1P63006 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx1P63006 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Lhx1P63006 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms