Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Pfn1P62962 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Pfn1P62962 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Pfn1P62962 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.02□□□□□ -0.81
Pfn1P62962 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Pfn1P62962 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.02□□□□□ -0.81
Pfn1P62962 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.02□□□□□ -0.81
Pfn1P62962 Gm21470-201ENSMUST00000187680 696 ntBASIC10.02□□□□□ -0.81
Pfn1P62962 Gm8000-201ENSMUST00000188378 592 ntBASIC10.02□□□□□ -0.81
Pfn1P62962 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.02□□□□□ -0.81
Pfn1P62962 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Pfn1P62962 Ndufaf2-202ENSMUST00000223734 556 ntBASIC10.02□□□□□ -0.81
Pfn1P62962 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.02□□□□□ -0.81
Pfn1P62962 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Gm15500-202ENSMUST00000071641 1019 ntBASIC10.02□□□□□ -0.81
Pfn1P62962 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Pfn1P62962 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Pfn1P62962 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.02□□□□□ -0.81
Pfn1P62962 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Pfn1P62962 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Pfn1P62962 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.02□□□□□ -0.81
Pfn1P62962 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pfn1P62962 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Pfn1P62962 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.01□□□□□ -0.81
Pfn1P62962 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Pfn1P62962 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.01□□□□□ -0.81
Pfn1P62962 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.01□□□□□ -0.81
Pfn1P62962 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.01□□□□□ -0.81
Pfn1P62962 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Gm11779-201ENSMUST00000118541 368 ntBASIC10.01□□□□□ -0.81
Pfn1P62962 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.01□□□□□ -0.81
Pfn1P62962 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.01□□□□□ -0.81
Pfn1P62962 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.01□□□□□ -0.81
Pfn1P62962 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.01□□□□□ -0.81
Pfn1P62962 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.01□□□□□ -0.81
Pfn1P62962 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.01□□□□□ -0.81
Pfn1P62962 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Gm8927-201ENSMUST00000181978 981 ntBASIC10.01□□□□□ -0.81
Pfn1P62962 Gm5264-201ENSMUST00000190584 848 ntBASIC10.01□□□□□ -0.81
Pfn1P62962 Gm29541-201ENSMUST00000191351 678 ntBASIC10.01□□□□□ -0.81
Pfn1P62962 AC153872.1-201ENSMUST00000199539 128 ntBASIC10.01□□□□□ -0.81
Pfn1P62962 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Pfn1P62962 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Gm3222-201ENSMUST00000071282 990 ntBASIC10.01□□□□□ -0.81
Pfn1P62962 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Pfn1P62962 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Pfn1P62962 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Pfn1P62962 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Pfn1P62962 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pfn1P62962 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Pfn1P62962 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms