Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gabra1P62812 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Gabra1P62812 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.87□□□□□ -0.67
Gabra1P62812 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.87□□□□□ -0.67
Gabra1P62812 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gabra1P62812 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Gabra1P62812 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gabra1P62812 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Gabra1P62812 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Gabra1P62812 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gabra1P62812 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gabra1P62812 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gabra1P62812 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gabra1P62812 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gabra1P62812 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gabra1P62812 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gabra1P62812 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Gabra1P62812 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.86□□□□□ -0.67
Gabra1P62812 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Gabra1P62812 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Gabra1P62812 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Gm25287-201ENSMUST00000103846 110 ntBASIC10.86□□□□□ -0.67
Gabra1P62812 Gm22918-201ENSMUST00000103855 110 ntBASIC10.86□□□□□ -0.67
Gabra1P62812 Gm29541-201ENSMUST00000191351 678 ntBASIC10.86□□□□□ -0.67
Gabra1P62812 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.86□□□□□ -0.67
Gabra1P62812 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Gabra1P62812 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.86□□□□□ -0.67
Gabra1P62812 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.86□□□□□ -0.67
Gabra1P62812 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Gabra1P62812 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.86□□□□□ -0.67
Gabra1P62812 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Gabra1P62812 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Gabra1P62812 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gabra1P62812 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.85□□□□□ -0.67
Gabra1P62812 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Gabra1P62812 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.85□□□□□ -0.67
Gabra1P62812 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.85□□□□□ -0.67
Gabra1P62812 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.85□□□□□ -0.67
Gabra1P62812 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Gm18889-201ENSMUST00000174284 929 ntBASIC10.85□□□□□ -0.67
Gabra1P62812 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.85□□□□□ -0.67
Gabra1P62812 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.85□□□□□ -0.67
Gabra1P62812 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Gm5425-201ENSMUST00000214125 459 ntBASIC10.85□□□□□ -0.67
Gabra1P62812 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.85□□□□□ -0.67
Gabra1P62812 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Gabra1P62812 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.85□□□□□ -0.67
Gabra1P62812 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Gabra1P62812 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gabra1P62812 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gabra1P62812 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gabra1P62812 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Gabra1P62812 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms