Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm6P62313 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.36□□□□□ -0.59
Lsm6P62313 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm6P62313 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Lsm6P62313 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Lsm6P62313 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm6P62313 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm6P62313 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.35□□□□□ -0.59
Lsm6P62313 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Lsm6P62313 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Lsm6P62313 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.35□□□□□ -0.59
Lsm6P62313 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.35□□□□□ -0.59
Lsm6P62313 Gm15806-201ENSMUST00000120696 955 ntBASIC11.35□□□□□ -0.59
Lsm6P62313 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Lsm6P62313 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.35□□□□□ -0.59
Lsm6P62313 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Lsm6P62313 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.35□□□□□ -0.59
Lsm6P62313 Gm27892-201ENSMUST00000185017 106 ntBASIC11.35□□□□□ -0.59
Lsm6P62313 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.35□□□□□ -0.59
Lsm6P62313 Gm9794-201ENSMUST00000202370 423 ntBASIC11.35□□□□□ -0.59
Lsm6P62313 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Gm10012-201ENSMUST00000078252 192 ntBASIC11.35□□□□□ -0.59
Lsm6P62313 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Lsm6P62313 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Lsm6P62313 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.35□□□□□ -0.59
Lsm6P62313 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Lsm6P62313 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Lsm6P62313 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Lsm6P62313 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Lsm6P62313 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.35□□□□□ -0.59
Lsm6P62313 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Lsm6P62313 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.35□□□□□ -0.59
Lsm6P62313 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lsm6P62313 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.34□□□□□ -0.59
Lsm6P62313 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.34□□□□□ -0.59
Lsm6P62313 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Lsm6P62313 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.34□□□□□ -0.59
Lsm6P62313 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Lsm6P62313 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.34□□□□□ -0.59
Lsm6P62313 Gm11814-201ENSMUST00000119515 929 ntBASIC11.34□□□□□ -0.59
Lsm6P62313 Gm11637-201ENSMUST00000120601 592 ntBASIC11.34□□□□□ -0.59
Lsm6P62313 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.34□□□□□ -0.59
Lsm6P62313 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.34□□□□□ -0.59
Lsm6P62313 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Lsm6P62313 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.34□□□□□ -0.59
Lsm6P62313 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Lsm6P62313 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Lsm6P62313 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Lsm6P62313 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Lsm6P62313 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.34□□□□□ -0.59
Lsm6P62313 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Lsm6P62313 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.34□□□□□ -0.59
Lsm6P62313 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Lsm6P62313 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.34□□□□□ -0.59
Lsm6P62313 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms