Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.75□□□□□ -0.53
Lsm3P62311 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Lsm3P62311 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.75□□□□□ -0.53
Lsm3P62311 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.75□□□□□ -0.53
Lsm3P62311 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.75□□□□□ -0.53
Lsm3P62311 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm3P62311 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Lsm3P62311 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.74□□□□□ -0.53
Lsm3P62311 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.74□□□□□ -0.53
Lsm3P62311 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.74□□□□□ -0.53
Lsm3P62311 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.74□□□□□ -0.53
Lsm3P62311 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Lsm3P62311 Gm13385-201ENSMUST00000121089 220 ntBASIC11.74□□□□□ -0.53
Lsm3P62311 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.74□□□□□ -0.53
Lsm3P62311 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.74□□□□□ -0.53
Lsm3P62311 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Lsm3P62311 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Lsm3P62311 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Lsm3P62311 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Lsm3P62311 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.74□□□□□ -0.53
Lsm3P62311 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lsm3P62311 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.74□□□□□ -0.53
Lsm3P62311 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lsm3P62311 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm3P62311 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.73□□□□□ -0.53
Lsm3P62311 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lsm3P62311 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.73□□□□□ -0.53
Lsm3P62311 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Lsm3P62311 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.73□□□□□ -0.53
Lsm3P62311 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Lsm3P62311 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.73□□□□□ -0.53
Lsm3P62311 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.73□□□□□ -0.53
Lsm3P62311 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.73□□□□□ -0.53
Lsm3P62311 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.73□□□□□ -0.53
Lsm3P62311 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lsm3P62311 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lsm3P62311 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Lsm3P62311 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Lsm3P62311 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lsm3P62311 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm3P62311 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm3P62311 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm3P62311 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm3P62311 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm3P62311 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm3P62311 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm3P62311 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lsm3P62311 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms