Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.2□□□□□ -0.3
Tubgcp3P58854 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.2□□□□□ -0.3
Tubgcp3P58854 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.2□□□□□ -0.3
Tubgcp3P58854 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tubgcp3P58854 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.19□□□□□ -0.3
Tubgcp3P58854 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Gm8598-201ENSMUST00000221184 836 ntBASIC13.19□□□□□ -0.3
Tubgcp3P58854 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.19□□□□□ -0.3
Tubgcp3P58854 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tubgcp3P58854 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.18□□□□□ -0.3
Tubgcp3P58854 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Mir686-201ENSMUST00000102174 109 ntBASIC13.18□□□□□ -0.3
Tubgcp3P58854 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Gm12138-201ENSMUST00000122180 951 ntBASIC13.18□□□□□ -0.3
Tubgcp3P58854 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.18□□□□□ -0.3
Tubgcp3P58854 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.18□□□□□ -0.3
Tubgcp3P58854 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubgcp3P58854 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tubgcp3P58854 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubgcp3P58854 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms