Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn18P56857 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cldn18P56857 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn18P56857 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.57□□□□□ -0.56
Cldn18P56857 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cldn18P56857 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.57□□□□□ -0.56
Cldn18P56857 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.57□□□□□ -0.56
Cldn18P56857 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Cldn18P56857 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.57□□□□□ -0.56
Cldn18P56857 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.57□□□□□ -0.56
Cldn18P56857 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.57□□□□□ -0.56
Cldn18P56857 Mir7085-201ENSMUST00000184353 66 ntBASIC11.57□□□□□ -0.56
Cldn18P56857 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Gm8099-201ENSMUST00000200510 742 ntBASIC11.57□□□□□ -0.56
Cldn18P56857 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.57□□□□□ -0.56
Cldn18P56857 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.57□□□□□ -0.56
Cldn18P56857 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.57□□□□□ -0.56
Cldn18P56857 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Cldn18P56857 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Cldn18P56857 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cldn18P56857 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.57□□□□□ -0.56
Cldn18P56857 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.57□□□□□ -0.56
Cldn18P56857 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.57□□□□□ -0.56
Cldn18P56857 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.57□□□□□ -0.56
Cldn18P56857 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn18P56857 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cldn18P56857 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cldn18P56857 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cldn18P56857 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cldn18P56857 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.56□□□□□ -0.56
Cldn18P56857 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldn18P56857 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldn18P56857 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Snora78-201ENSMUST00000158630 128 ntBASIC11.56□□□□□ -0.56
Cldn18P56857 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Gm23363-201ENSMUST00000175024 79 ntBASIC11.56□□□□□ -0.56
Cldn18P56857 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cldn18P56857 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.56□□□□□ -0.56
Cldn18P56857 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.56□□□□□ -0.56
Cldn18P56857 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Cldn18P56857 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cldn18P56857 Mir339-201ENSMUST00000083659 96 ntBASIC11.56□□□□□ -0.56
Cldn18P56857 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldn18P56857 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Cldn18P56857 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
Cldn18P56857 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.56□□□□□ -0.56
Cldn18P56857 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn18P56857 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldn18P56857 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cldn18P56857 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.55□□□□□ -0.56
Cldn18P56857 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldn18P56857 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Cldn18P56857 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.55□□□□□ -0.56
Cldn18P56857 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldn18P56857 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldn18P56857 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldn18P56857 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldn18P56857 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.55□□□□□ -0.56
Cldn18P56857 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms