Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cks2P56390 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks2P56390 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Gm13616-201ENSMUST00000120600 222 ntBASIC10.78□□□□□ -0.68
Cks2P56390 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks2P56390 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.78□□□□□ -0.68
Cks2P56390 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Gm21854-201ENSMUST00000179901 471 ntBASIC10.78□□□□□ -0.68
Cks2P56390 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.78□□□□□ -0.68
Cks2P56390 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.78□□□□□ -0.68
Cks2P56390 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Cks2P56390 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks2P56390 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks2P56390 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks2P56390 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.78□□□□□ -0.68
Cks2P56390 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks2P56390 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks2P56390 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Cks2P56390 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Cks2P56390 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cks2P56390 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cks2P56390 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cks2P56390 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Cks2P56390 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Cks2P56390 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cks2P56390 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cks2P56390 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cks2P56390 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cks2P56390 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.77□□□□□ -0.69
Cks2P56390 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.77□□□□□ -0.69
Cks2P56390 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cks2P56390 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.77□□□□□ -0.69
Cks2P56390 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cks2P56390 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks2P56390 Gm23935-201ENSMUST00000102303 57 ntBASIC10.77□□□□□ -0.69
Cks2P56390 Gm24270-201ENSMUST00000102326 57 ntBASIC10.77□□□□□ -0.69
Cks2P56390 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.77□□□□□ -0.69
Cks2P56390 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks2P56390 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.77□□□□□ -0.69
Cks2P56390 Gm24245-201ENSMUST00000157318 57 ntBASIC10.77□□□□□ -0.69
Cks2P56390 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.77□□□□□ -0.69
Cks2P56390 Gm43575-201ENSMUST00000196420 516 ntBASIC10.77□□□□□ -0.69
Cks2P56390 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.77□□□□□ -0.69
Cks2P56390 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks2P56390 Gm9797-201ENSMUST00000052902 613 ntBASIC10.77□□□□□ -0.69
Cks2P56390 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Cks2P56390 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks2P56390 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks2P56390 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks2P56390 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cks2P56390 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks2P56390 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.77□□□□□ -0.69
Cks2P56390 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks2P56390 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cks2P56390 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks2P56390 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks2P56390 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks2P56390 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cks2P56390 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks2P56390 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks2P56390 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cks2P56390 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks2P56390 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks2P56390 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks2P56390 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks2P56390 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks2P56390 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks2P56390 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.76□□□□□ -0.69
Cks2P56390 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.76□□□□□ -0.69
Cks2P56390 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks2P56390 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cks2P56390 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.76□□□□□ -0.69
Cks2P56390 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.76□□□□□ -0.69
Cks2P56390 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.76□□□□□ -0.69
Cks2P56390 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.76□□□□□ -0.69
Cks2P56390 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cks2P56390 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks2P56390 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cks2P56390 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms