Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.86□□□□□ -0.35
Atxn1P54254 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atxn1P54254 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Atxn1P54254 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Atxn1P54254 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Atxn1P54254 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atxn1P54254 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atxn1P54254 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.86□□□□□ -0.35
Atxn1P54254 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atxn1P54254 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Atxn1P54254 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.86□□□□□ -0.35
Atxn1P54254 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Atxn1P54254 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Atxn1P54254 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Atxn1P54254 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.85□□□□□ -0.35
Atxn1P54254 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Gm10434-201ENSMUST00000101158 471 ntBASIC12.85□□□□□ -0.35
Atxn1P54254 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Atxn1P54254 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Atxn1P54254 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.85□□□□□ -0.35
Atxn1P54254 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.85□□□□□ -0.35
Atxn1P54254 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.85□□□□□ -0.35
Atxn1P54254 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Atxn1P54254 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Atxn1P54254 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Atxn1P54254 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Atxn1P54254 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atxn1P54254 Rubie-203ENSMUST00000227803 2430 ntBASIC12.84□□□□□ -0.35
Atxn1P54254 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.84□□□□□ -0.35
Atxn1P54254 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.84□□□□□ -0.35
Atxn1P54254 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.84□□□□□ -0.35
Atxn1P54254 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Atxn1P54254 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Atxn1P54254 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Gm13813-201ENSMUST00000120998 787 ntBASIC12.84□□□□□ -0.35
Atxn1P54254 Gm12403-201ENSMUST00000121384 959 ntBASIC12.84□□□□□ -0.35
Atxn1P54254 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.84□□□□□ -0.35
Atxn1P54254 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.84□□□□□ -0.35
Atxn1P54254 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.84□□□□□ -0.35
Atxn1P54254 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Atxn1P54254 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.84□□□□□ -0.35
Atxn1P54254 Gm18584-201ENSMUST00000203098 964 ntBASIC12.84□□□□□ -0.35
Atxn1P54254 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.84□□□□□ -0.35
Atxn1P54254 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.84□□□□□ -0.35
Atxn1P54254 Gm19163-201ENSMUST00000223313 780 ntBASIC12.84□□□□□ -0.35
Atxn1P54254 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.84□□□□□ -0.35
Atxn1P54254 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.84□□□□□ -0.35
Atxn1P54254 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.84□□□□□ -0.35
Atxn1P54254 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms