Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox3P53784 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox3P53784 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.41□□□□□ -0.42
Sox3P53784 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox3P53784 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox3P53784 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox3P53784 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.41□□□□□ -0.42
Sox3P53784 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Sox3P53784 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox3P53784 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox3P53784 Gm5687-201ENSMUST00000118252 640 ntBASIC12.41□□□□□ -0.42
Sox3P53784 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sox3P53784 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox3P53784 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox3P53784 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sox3P53784 Gm25927-201ENSMUST00000175058 117 ntBASIC12.41□□□□□ -0.42
Sox3P53784 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.41□□□□□ -0.42
Sox3P53784 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox3P53784 Mir6979-201ENSMUST00000183927 56 ntBASIC12.41□□□□□ -0.42
Sox3P53784 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox3P53784 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox3P53784 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.41□□□□□ -0.42
Sox3P53784 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sox3P53784 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox3P53784 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Sox3P53784 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox3P53784 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox3P53784 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Sox3P53784 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox3P53784 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sox3P53784 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox3P53784 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox3P53784 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.4□□□□□ -0.42
Sox3P53784 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.4□□□□□ -0.42
Sox3P53784 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sox3P53784 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sox3P53784 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.4□□□□□ -0.42
Sox3P53784 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.4□□□□□ -0.42
Sox3P53784 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Sox3P53784 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.4□□□□□ -0.42
Sox3P53784 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.4□□□□□ -0.42
Sox3P53784 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sox3P53784 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox3P53784 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sox3P53784 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sox3P53784 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.4□□□□□ -0.43
Sox3P53784 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sox3P53784 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sox3P53784 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sox3P53784 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sox3P53784 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.43
Sox3P53784 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sox3P53784 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sox3P53784 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox3P53784 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox3P53784 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox3P53784 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.39□□□□□ -0.43
Sox3P53784 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sox3P53784 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox3P53784 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Sox3P53784 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox3P53784 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox3P53784 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox3P53784 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox3P53784 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sox3P53784 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.39□□□□□ -0.43
Sox3P53784 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox3P53784 Gm15370-201ENSMUST00000117158 253 ntBASIC12.39□□□□□ -0.43
Sox3P53784 Gm13297-201ENSMUST00000120205 934 ntBASIC12.39□□□□□ -0.43
Sox3P53784 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox3P53784 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox3P53784 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox3P53784 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox3P53784 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox3P53784 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox3P53784 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sox3P53784 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox3P53784 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox3P53784 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sox3P53784 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox3P53784 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Sox3P53784 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sox3P53784 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms