Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Gm13492-201ENSMUST00000119772 665 ntBASIC13.16□□□□□ -0.3
Sox1P53783 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox1P53783 Gm5616-201ENSMUST00000165252 384 ntBASIC13.16□□□□□ -0.3
Sox1P53783 Gm8741-201ENSMUST00000174736 384 ntBASIC13.16□□□□□ -0.3
Sox1P53783 Mir7076-201ENSMUST00000183519 74 ntBASIC13.16□□□□□ -0.3
Sox1P53783 Mir7686-201ENSMUST00000200604 57 ntBASIC13.16□□□□□ -0.3
Sox1P53783 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Gm25201-201ENSMUST00000083093 170 ntBASIC13.16□□□□□ -0.3
Sox1P53783 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox1P53783 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sox1P53783 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox1P53783 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Sox1P53783 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sox1P53783 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sox1P53783 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Sox1P53783 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.15□□□□□ -0.3
Sox1P53783 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.15□□□□□ -0.3
Sox1P53783 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.15□□□□□ -0.3
Sox1P53783 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Sox1P53783 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sox1P53783 Gm2517-201ENSMUST00000215651 348 ntBASIC13.15□□□□□ -0.3
Sox1P53783 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sox1P53783 Gm9996-201ENSMUST00000070359 913 ntBASIC13.15□□□□□ -0.3
Sox1P53783 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Gm21811-201ENSMUST00000096485 930 ntBASIC13.15□□□□□ -0.3
Sox1P53783 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sox1P53783 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Sox1P53783 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sox1P53783 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.15□□□□□ -0.3
Sox1P53783 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Sox1P53783 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.15□□□□□ -0.3
Sox1P53783 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox1P53783 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.15□□□□□ -0.3
Sox1P53783 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sox1P53783 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Sox1P53783 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox1P53783 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sox1P53783 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox1P53783 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox1P53783 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.14□□□□□ -0.31
Sox1P53783 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox1P53783 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox1P53783 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox1P53783 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox1P53783 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox1P53783 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox1P53783 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms