Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
GdnfP48540 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
GdnfP48540 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.35□□□□□ -0.59
GdnfP48540 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.35□□□□□ -0.59
GdnfP48540 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
GdnfP48540 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Gm7730-201ENSMUST00000212486 454 ntBASIC11.35□□□□□ -0.59
GdnfP48540 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.35□□□□□ -0.59
GdnfP48540 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.35□□□□□ -0.59
GdnfP48540 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
GdnfP48540 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
GdnfP48540 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
GdnfP48540 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
GdnfP48540 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.35□□□□□ -0.59
GdnfP48540 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.35□□□□□ -0.59
GdnfP48540 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
GdnfP48540 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.35□□□□□ -0.59
GdnfP48540 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
GdnfP48540 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.34□□□□□ -0.59
GdnfP48540 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.34□□□□□ -0.59
GdnfP48540 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
GdnfP48540 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
GdnfP48540 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
GdnfP48540 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.34□□□□□ -0.59
GdnfP48540 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
GdnfP48540 Gm27437-201ENSMUST00000183429 107 ntBASIC11.34□□□□□ -0.59
GdnfP48540 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.34□□□□□ -0.59
GdnfP48540 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.34□□□□□ -0.59
GdnfP48540 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.34□□□□□ -0.59
GdnfP48540 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.34□□□□□ -0.59
GdnfP48540 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
GdnfP48540 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.34□□□□□ -0.59
GdnfP48540 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
GdnfP48540 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.34□□□□□ -0.59
GdnfP48540 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.34□□□□□ -0.59
GdnfP48540 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
GdnfP48540 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
GdnfP48540 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
GdnfP48540 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
GdnfP48540 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.33□□□□□ -0.59
GdnfP48540 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.59
GdnfP48540 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
GdnfP48540 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
GdnfP48540 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
GdnfP48540 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
GdnfP48540 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.33□□□□□ -0.6
GdnfP48540 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.33□□□□□ -0.6
GdnfP48540 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.33□□□□□ -0.6
GdnfP48540 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Mir6977-201ENSMUST00000184960 64 ntBASIC11.33□□□□□ -0.6
GdnfP48540 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.33□□□□□ -0.6
GdnfP48540 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms