Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rfx2P48379 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rfx2P48379 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Rfx2P48379 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.56□□□□□ -0.24
Rfx2P48379 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Rfx2P48379 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.55□□□□□ -0.24
Rfx2P48379 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Rfx2P48379 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.55□□□□□ -0.24
Rfx2P48379 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Rfx2P48379 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Rfx2P48379 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Rfx2P48379 Gm38266-201ENSMUST00000194931 421 ntBASIC13.55□□□□□ -0.24
Rfx2P48379 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Rfx2P48379 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Rfx2P48379 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.55□□□□□ -0.24
Rfx2P48379 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.55□□□□□ -0.24
Rfx2P48379 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Rfx2P48379 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Rfx2P48379 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Rfx2P48379 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
Rfx2P48379 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfx2P48379 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.54□□□□□ -0.24
Rfx2P48379 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rfx2P48379 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.54□□□□□ -0.24
Rfx2P48379 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rfx2P48379 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.54□□□□□ -0.24
Rfx2P48379 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.54□□□□□ -0.24
Rfx2P48379 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.54□□□□□ -0.24
Rfx2P48379 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.54□□□□□ -0.24
Rfx2P48379 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.54□□□□□ -0.24
Rfx2P48379 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.54□□□□□ -0.24
Rfx2P48379 Gm3961-201ENSMUST00000204425 994 ntBASIC13.54□□□□□ -0.24
Rfx2P48379 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.54□□□□□ -0.24
Rfx2P48379 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.54□□□□□ -0.24
Rfx2P48379 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Rfx2P48379 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.54□□□□□ -0.24
Rfx2P48379 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.54□□□□□ -0.24
Rfx2P48379 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.54□□□□□ -0.24
Rfx2P48379 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx2P48379 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms