Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Gm17208-201ENSMUST00000168388 535 ntBASIC12.23□□□□□ -0.45
Nkx2-6P43688 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.23□□□□□ -0.45
Nkx2-6P43688 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.23□□□□□ -0.45
Nkx2-6P43688 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.23□□□□□ -0.45
Nkx2-6P43688 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-6P43688 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.23□□□□□ -0.45
Nkx2-6P43688 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-6P43688 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.22□□□□□ -0.45
Nkx2-6P43688 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-6P43688 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-6P43688 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Mir7221-201ENSMUST00000184009 72 ntBASIC12.22□□□□□ -0.45
Nkx2-6P43688 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.22□□□□□ -0.45
Nkx2-6P43688 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Gm18056-201ENSMUST00000207670 568 ntBASIC12.22□□□□□ -0.45
Nkx2-6P43688 Gm18061-201ENSMUST00000208350 562 ntBASIC12.22□□□□□ -0.45
Nkx2-6P43688 Gm18063-201ENSMUST00000208529 568 ntBASIC12.22□□□□□ -0.45
Nkx2-6P43688 Gm18052-201ENSMUST00000208750 559 ntBASIC12.22□□□□□ -0.45
Nkx2-6P43688 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Gm6458-201ENSMUST00000211573 635 ntBASIC12.22□□□□□ -0.45
Nkx2-6P43688 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.22□□□□□ -0.45
Nkx2-6P43688 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.22□□□□□ -0.45
Nkx2-6P43688 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.22□□□□□ -0.45
Nkx2-6P43688 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-6P43688 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.21□□□□□ -0.45
Nkx2-6P43688 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-6P43688 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-6P43688 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-6P43688 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-6P43688 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-6P43688 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Nkx2-6P43688 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-6P43688 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-6P43688 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-6P43688 Gm15808-201ENSMUST00000119046 604 ntBASIC12.21□□□□□ -0.45
Nkx2-6P43688 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-6P43688 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.21□□□□□ -0.45
Nkx2-6P43688 Gm29199-201ENSMUST00000187766 775 ntBASIC12.21□□□□□ -0.45
Nkx2-6P43688 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Nkx2-6P43688 Gm8099-201ENSMUST00000200510 742 ntBASIC12.21□□□□□ -0.45
Nkx2-6P43688 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.21□□□□□ -0.45
Nkx2-6P43688 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.21□□□□□ -0.45
Nkx2-6P43688 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-6P43688 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-6P43688 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.21□□□□□ -0.45
Nkx2-6P43688 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-6P43688 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-6P43688 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-6P43688 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-6P43688 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-6P43688 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Nkx2-6P43688 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Nkx2-6P43688 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Nkx2-6P43688 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-6P43688 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-6P43688 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-6P43688 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-6P43688 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-6P43688 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-6P43688 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 136.5 ms