Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.69□□□□□ -0.7
Hist1h1aP43275 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1aP43275 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Hist1h1aP43275 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1aP43275 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Hist1h1aP43275 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1aP43275 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1aP43275 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1aP43275 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1aP43275 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hist1h1aP43275 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.68□□□□□ -0.7
Hist1h1aP43275 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.68□□□□□ -0.7
Hist1h1aP43275 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.68□□□□□ -0.7
Hist1h1aP43275 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.68□□□□□ -0.7
Hist1h1aP43275 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Gm24447-201ENSMUST00000083977 338 ntBASIC10.68□□□□□ -0.7
Hist1h1aP43275 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hist1h1aP43275 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Gm38144-201ENSMUST00000192790 465 ntBASIC10.67□□□□□ -0.7
Hist1h1aP43275 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.67□□□□□ -0.7
Hist1h1aP43275 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hist1h1aP43275 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hist1h1aP43275 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms