Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Gm10608-202ENSMUST00000213924 676 ntBASIC12.38□□□□□ -0.43
Tnfsf9P41274 Gm9368-201ENSMUST00000219348 831 ntBASIC12.38□□□□□ -0.43
Tnfsf9P41274 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.38□□□□□ -0.43
Tnfsf9P41274 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf9P41274 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.38□□□□□ -0.43
Tnfsf9P41274 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Tnfsf9P41274 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Tnfsf9P41274 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.37□□□□□ -0.43
Tnfsf9P41274 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Gm12241-201ENSMUST00000118330 726 ntBASIC12.37□□□□□ -0.43
Tnfsf9P41274 Gm14723-201ENSMUST00000118686 215 ntBASIC12.37□□□□□ -0.43
Tnfsf9P41274 Gm14704-201ENSMUST00000120300 874 ntBASIC12.37□□□□□ -0.43
Tnfsf9P41274 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.37□□□□□ -0.43
Tnfsf9P41274 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Gm37489-201ENSMUST00000191883 159 ntBASIC12.37□□□□□ -0.43
Tnfsf9P41274 Gm8099-201ENSMUST00000200510 742 ntBASIC12.37□□□□□ -0.43
Tnfsf9P41274 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.37□□□□□ -0.43
Tnfsf9P41274 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf9P41274 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.36□□□□□ -0.43
Tnfsf9P41274 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf9P41274 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.36□□□□□ -0.43
Tnfsf9P41274 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.36□□□□□ -0.43
Tnfsf9P41274 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.36□□□□□ -0.43
Tnfsf9P41274 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.36□□□□□ -0.43
Tnfsf9P41274 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf9P41274 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf9P41274 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms