Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.87□□□□□ -0.67
Mmp9P41245 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Mmp9P41245 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.87□□□□□ -0.67
Mmp9P41245 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
Mmp9P41245 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
Mmp9P41245 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.87□□□□□ -0.67
Mmp9P41245 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.87□□□□□ -0.67
Mmp9P41245 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.87□□□□□ -0.67
Mmp9P41245 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC10.87□□□□□ -0.67
Mmp9P41245 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.87□□□□□ -0.67
Mmp9P41245 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Gm8927-201ENSMUST00000181978 981 ntBASIC10.87□□□□□ -0.67
Mmp9P41245 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Gm6916-202ENSMUST00000205523 195 ntBASIC10.87□□□□□ -0.67
Mmp9P41245 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.87□□□□□ -0.67
Mmp9P41245 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Gm3222-201ENSMUST00000071282 990 ntBASIC10.87□□□□□ -0.67
Mmp9P41245 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Mmp9P41245 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.87□□□□□ -0.67
Mmp9P41245 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.87□□□□□ -0.67
Mmp9P41245 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Mmp9P41245 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Mmp9P41245 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.87□□□□□ -0.67
Mmp9P41245 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Mmp9P41245 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mmp9P41245 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.87□□□□□ -0.67
Mmp9P41245 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Mmp9P41245 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Mmp9P41245 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Gm15770-201ENSMUST00000117498 584 ntBASIC10.86□□□□□ -0.67
Mmp9P41245 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Mmp9P41245 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.86□□□□□ -0.67
Mmp9P41245 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.86□□□□□ -0.67
Mmp9P41245 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.86□□□□□ -0.67
Mmp9P41245 Gm18049-201ENSMUST00000208909 581 ntBASIC10.86□□□□□ -0.67
Mmp9P41245 Gm7653-201ENSMUST00000214567 508 ntBASIC10.86□□□□□ -0.67
Mmp9P41245 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.86□□□□□ -0.67
Mmp9P41245 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.86□□□□□ -0.67
Mmp9P41245 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.86□□□□□ -0.67
Mmp9P41245 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.86□□□□□ -0.67
Mmp9P41245 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.86□□□□□ -0.67
Mmp9P41245 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Mmp9P41245 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mmp9P41245 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Mmp9P41245 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mmp9P41245 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms