Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Fen1P39749 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Fen1P39749 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Fen1P39749 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Fen1P39749 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Fen1P39749 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Fen1P39749 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Fen1P39749 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Fen1P39749 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Fen1P39749 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Fen1P39749 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Fen1P39749 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Fen1P39749 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Fen1P39749 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Fen1P39749 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.02□□□□□ -0.33
Fen1P39749 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Fen1P39749 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Fen1P39749 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
Fen1P39749 Gm15240-201ENSMUST00000118156 720 ntBASIC13.02□□□□□ -0.33
Fen1P39749 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Fen1P39749 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.02□□□□□ -0.33
Fen1P39749 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Fen1P39749 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.02□□□□□ -0.33
Fen1P39749 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.02□□□□□ -0.33
Fen1P39749 Gm17330-201ENSMUST00000221047 165 ntBASIC13.02□□□□□ -0.33
Fen1P39749 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fen1P39749 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fen1P39749 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fen1P39749 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.02□□□□□ -0.33
Fen1P39749 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fen1P39749 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Fen1P39749 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fen1P39749 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Fen1P39749 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fen1P39749 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fen1P39749 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Fen1P39749 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.02□□□□□ -0.33
Fen1P39749 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fen1P39749 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fen1P39749 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fen1P39749 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Fen1P39749 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.01□□□□□ -0.33
Fen1P39749 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.01□□□□□ -0.33
Fen1P39749 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.01□□□□□ -0.33
Fen1P39749 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.01□□□□□ -0.33
Fen1P39749 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.01□□□□□ -0.33
Fen1P39749 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.01□□□□□ -0.33
Fen1P39749 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.01□□□□□ -0.33
Fen1P39749 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.01□□□□□ -0.33
Fen1P39749 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Fen1P39749 Gm6888-201ENSMUST00000221983 706 ntBASIC13.01□□□□□ -0.33
Fen1P39749 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.01□□□□□ -0.33
Fen1P39749 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Fen1P39749 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Fen1P39749 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fen1P39749 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Fen1P39749 Gm9279-201ENSMUST00000223175 1606 ntBASIC13□□□□□ -0.33
Fen1P39749 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Fen1P39749 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Gm12537-201ENSMUST00000119266 1002 ntBASIC13□□□□□ -0.33
Fen1P39749 Gm12070-201ENSMUST00000119551 1002 ntBASIC13□□□□□ -0.33
Fen1P39749 Gm12671-201ENSMUST00000119978 1002 ntBASIC13□□□□□ -0.33
Fen1P39749 Gm13292-201ENSMUST00000120014 1000 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms