Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rfc1P35601 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rfc1P35601 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Gm15460-201ENSMUST00000118147 391 ntBASIC13.63□□□□□ -0.23
Rfc1P35601 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rfc1P35601 Gm21470-201ENSMUST00000187680 696 ntBASIC13.63□□□□□ -0.23
Rfc1P35601 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.63□□□□□ -0.23
Rfc1P35601 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.63□□□□□ -0.23
Rfc1P35601 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Rfc1P35601 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rfc1P35601 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfc1P35601 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Rfc1P35601 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rfc1P35601 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.62□□□□□ -0.23
Rfc1P35601 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.62□□□□□ -0.23
Rfc1P35601 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.62□□□□□ -0.23
Rfc1P35601 Gm22175-201ENSMUST00000175007 78 ntBASIC13.62□□□□□ -0.23
Rfc1P35601 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.62□□□□□ -0.23
Rfc1P35601 Gm27430-201ENSMUST00000184585 107 ntBASIC13.62□□□□□ -0.23
Rfc1P35601 Gm44333-201ENSMUST00000197168 107 ntBASIC13.62□□□□□ -0.23
Rfc1P35601 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Rfc1P35601 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rfc1P35601 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.62□□□□□ -0.23
Rfc1P35601 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.62□□□□□ -0.23
Rfc1P35601 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rfc1P35601 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.62□□□□□ -0.23
Rfc1P35601 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.62□□□□□ -0.23
Rfc1P35601 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rfc1P35601 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rfc1P35601 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfc1P35601 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.62□□□□□ -0.23
Rfc1P35601 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Rfc1P35601 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rfc1P35601 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.61□□□□□ -0.23
Rfc1P35601 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.61□□□□□ -0.23
Rfc1P35601 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.61□□□□□ -0.23
Rfc1P35601 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Rfc1P35601 Gm15678-201ENSMUST00000117573 960 ntBASIC13.61□□□□□ -0.23
Rfc1P35601 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Rfc1P35601 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.61□□□□□ -0.23
Rfc1P35601 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Gm27618-201ENSMUST00000183671 60 ntBASIC13.61□□□□□ -0.23
Rfc1P35601 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.61□□□□□ -0.23
Rfc1P35601 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.61□□□□□ -0.23
Rfc1P35601 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.61□□□□□ -0.23
Rfc1P35601 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms