Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sftpa1P35242 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sftpa1P35242 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.92□□□□□ -0.5
Sftpa1P35242 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sftpa1P35242 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.91□□□□□ -0.5
Sftpa1P35242 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Sftpa1P35242 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sftpa1P35242 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sftpa1P35242 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sftpa1P35242 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Gm13492-201ENSMUST00000119772 665 ntBASIC11.91□□□□□ -0.5
Sftpa1P35242 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Gm24749-201ENSMUST00000157838 343 ntBASIC11.91□□□□□ -0.5
Sftpa1P35242 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.91□□□□□ -0.5
Sftpa1P35242 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.91□□□□□ -0.5
Sftpa1P35242 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sftpa1P35242 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sftpa1P35242 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sftpa1P35242 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sftpa1P35242 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sftpa1P35242 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sftpa1P35242 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.91□□□□□ -0.5
Sftpa1P35242 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sftpa1P35242 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.9□□□□□ -0.5
Sftpa1P35242 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sftpa1P35242 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Sftpa1P35242 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Sftpa1P35242 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.9□□□□□ -0.5
Sftpa1P35242 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.9□□□□□ -0.5
Sftpa1P35242 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.9□□□□□ -0.5
Sftpa1P35242 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Sftpa1P35242 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Gm37835-201ENSMUST00000193305 361 ntBASIC11.9□□□□□ -0.5
Sftpa1P35242 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.9□□□□□ -0.5
Sftpa1P35242 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.9□□□□□ -0.5
Sftpa1P35242 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.9□□□□□ -0.5
Sftpa1P35242 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Sftpa1P35242 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sftpa1P35242 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.9□□□□□ -0.5
Sftpa1P35242 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sftpa1P35242 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms