Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.24□□□□□ -0.29
Mmp13P33435 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Mmp13P33435 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.24□□□□□ -0.29
Mmp13P33435 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.24□□□□□ -0.29
Mmp13P33435 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Gm5356-201ENSMUST00000093326 615 ntBASIC13.24□□□□□ -0.29
Mmp13P33435 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Mmp13P33435 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.24□□□□□ -0.29
Mmp13P33435 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.24□□□□□ -0.29
Mmp13P33435 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Mmp13P33435 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Gm13689-201ENSMUST00000119360 685 ntBASIC13.23□□□□□ -0.29
Mmp13P33435 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.23□□□□□ -0.29
Mmp13P33435 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.23□□□□□ -0.29
Mmp13P33435 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.23□□□□□ -0.29
Mmp13P33435 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Mmp13P33435 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Mmp13P33435 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Mmp13P33435 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Mmp13P33435 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Mmp13P33435 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Mmp13P33435 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Mmp13P33435 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Mmp13P33435 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Mmp13P33435 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.22□□□□□ -0.29
Mmp13P33435 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.22□□□□□ -0.29
Mmp13P33435 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.22□□□□□ -0.29
Mmp13P33435 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Mmp13P33435 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Mmp13P33435 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Mmp13P33435 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.22□□□□□ -0.29
Mmp13P33435 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.22□□□□□ -0.29
Mmp13P33435 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.22□□□□□ -0.29
Mmp13P33435 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Mmp13P33435 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Mmp13P33435 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Mmp13P33435 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Mmp13P33435 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.22□□□□□ -0.29
Mmp13P33435 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Mmp13P33435 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Mmp13P33435 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp13P33435 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.22□□□□□ -0.29
Mmp13P33435 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms