Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Gm27533-201ENSMUST00000183800 152 ntBASIC11.13□□□□□ -0.63
Slc6a1P31648 Gm44344-201ENSMUST00000200287 129 ntBASIC11.13□□□□□ -0.63
Slc6a1P31648 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.13□□□□□ -0.63
Slc6a1P31648 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.13□□□□□ -0.63
Slc6a1P31648 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Slc6a1P31648 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Slc6a1P31648 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Slc6a1P31648 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Slc6a1P31648 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.12□□□□□ -0.63
Slc6a1P31648 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.12□□□□□ -0.63
Slc6a1P31648 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Slc6a1P31648 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.12□□□□□ -0.63
Slc6a1P31648 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm13223-201ENSMUST00000118609 747 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.12□□□□□ -0.63
Slc6a1P31648 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Slc6a1P31648 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm27437-201ENSMUST00000183429 107 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm29310-201ENSMUST00000185468 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm21825-201ENSMUST00000185728 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm29109-201ENSMUST00000185895 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm21896-201ENSMUST00000186520 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm21873-201ENSMUST00000186728 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm21794-201ENSMUST00000187056 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm21880-201ENSMUST00000187275 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm21826-201ENSMUST00000187451 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm21198-201ENSMUST00000188393 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm21749-201ENSMUST00000189343 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm21901-201ENSMUST00000189568 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm29424-201ENSMUST00000189716 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm28599-201ENSMUST00000189838 694 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm21867-201ENSMUST00000189917 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm29269-201ENSMUST00000190087 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm21722-201ENSMUST00000190153 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm28423-201ENSMUST00000190701 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm21899-201ENSMUST00000190745 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm21910-201ENSMUST00000191163 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm21849-201ENSMUST00000191571 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm28678-201ENSMUST00000191593 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm20910-201ENSMUST00000193268 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm21871-201ENSMUST00000194621 696 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.12□□□□□ -0.63
Slc6a1P31648 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.12□□□□□ -0.63
Slc6a1P31648 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.12□□□□□ -0.63
Slc6a1P31648 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.12□□□□□ -0.63
Slc6a1P31648 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.12□□□□□ -0.63
Slc6a1P31648 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Slc6a1P31648 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Slc6a1P31648 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.12□□□□□ -0.63
Slc6a1P31648 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Slc6a1P31648 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.11□□□□□ -0.63
Slc6a1P31648 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms