Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
VtnP29788 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
VtnP29788 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.73□□□□□ -0.53
VtnP29788 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.73□□□□□ -0.53
VtnP29788 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.73□□□□□ -0.53
VtnP29788 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
VtnP29788 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.73□□□□□ -0.53
VtnP29788 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.73□□□□□ -0.53
VtnP29788 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.73□□□□□ -0.53
VtnP29788 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
VtnP29788 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.73□□□□□ -0.53
VtnP29788 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.73□□□□□ -0.53
VtnP29788 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.73□□□□□ -0.53
VtnP29788 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.73□□□□□ -0.53
VtnP29788 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.73□□□□□ -0.53
VtnP29788 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.73□□□□□ -0.53
VtnP29788 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
VtnP29788 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Gm9823-201ENSMUST00000051212 327 ntBASIC11.73□□□□□ -0.53
VtnP29788 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Gm10146-201ENSMUST00000072739 309 ntBASIC11.73□□□□□ -0.53
VtnP29788 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
VtnP29788 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
VtnP29788 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
VtnP29788 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.72□□□□□ -0.53
VtnP29788 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
VtnP29788 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
VtnP29788 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
VtnP29788 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.72□□□□□ -0.53
VtnP29788 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.72□□□□□ -0.53
VtnP29788 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.72□□□□□ -0.53
VtnP29788 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
VtnP29788 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.72□□□□□ -0.53
VtnP29788 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Gm27682-201ENSMUST00000183930 110 ntBASIC11.72□□□□□ -0.53
VtnP29788 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.72□□□□□ -0.53
VtnP29788 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.72□□□□□ -0.53
VtnP29788 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
VtnP29788 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.72□□□□□ -0.53
VtnP29788 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
VtnP29788 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.72□□□□□ -0.53
VtnP29788 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.72□□□□□ -0.53
VtnP29788 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
VtnP29788 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.71□□□□□ -0.53
VtnP29788 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
VtnP29788 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
VtnP29788 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
VtnP29788 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms