Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Matn2-206ENSMUST00000228570 2798 ntBASIC14.79□□□□□ -0.04
Vcam1P29533 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vcam1P29533 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Vcam1P29533 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vcam1P29533 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Vcam1P29533 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vcam1P29533 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Vcam1P29533 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.79□□□□□ -0.04
Vcam1P29533 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Vcam1P29533 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Gm14208-201ENSMUST00000119645 678 ntBASIC14.79□□□□□ -0.04
Vcam1P29533 Gm15703-201ENSMUST00000120250 880 ntBASIC14.79□□□□□ -0.04
Vcam1P29533 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.79□□□□□ -0.04
Vcam1P29533 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.79□□□□□ -0.04
Vcam1P29533 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Vcam1P29533 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.79□□□□□ -0.04
Vcam1P29533 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.79□□□□□ -0.04
Vcam1P29533 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.79□□□□□ -0.04
Vcam1P29533 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.79□□□□□ -0.04
Vcam1P29533 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.79□□□□□ -0.04
Vcam1P29533 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.79□□□□□ -0.04
Vcam1P29533 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vcam1P29533 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcam1P29533 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Vcam1P29533 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Vcam1P29533 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Vcam1P29533 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vcam1P29533 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Vcam1P29533 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Gm14028-201ENSMUST00000117434 479 ntBASIC14.78□□□□□ -0.04
Vcam1P29533 Gm27023-201ENSMUST00000182372 285 ntBASIC14.78□□□□□ -0.04
Vcam1P29533 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.78□□□□□ -0.04
Vcam1P29533 Gm45224-201ENSMUST00000208203 414 ntBASIC14.78□□□□□ -0.04
Vcam1P29533 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.78□□□□□ -0.04
Vcam1P29533 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Vcam1P29533 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.78□□□□□ -0.04
Vcam1P29533 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcam1P29533 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vcam1P29533 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Vcam1P29533 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.04
Vcam1P29533 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Vcam1P29533 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vcam1P29533 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vcam1P29533 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vcam1P29533 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms