Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.98□□□□□ -0.33
RxrbP28704 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
RxrbP28704 Gm38144-201ENSMUST00000192790 465 ntBASIC12.98□□□□□ -0.33
RxrbP28704 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.98□□□□□ -0.33
RxrbP28704 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.98□□□□□ -0.33
RxrbP28704 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.98□□□□□ -0.33
RxrbP28704 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
RxrbP28704 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RxrbP28704 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RxrbP28704 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
RxrbP28704 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RxrbP28704 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RxrbP28704 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.97□□□□□ -0.33
RxrbP28704 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
RxrbP28704 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.97□□□□□ -0.33
RxrbP28704 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.97□□□□□ -0.33
RxrbP28704 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.97□□□□□ -0.33
RxrbP28704 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RxrbP28704 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RxrbP28704 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.97□□□□□ -0.33
RxrbP28704 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.97□□□□□ -0.33
RxrbP28704 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.97□□□□□ -0.33
RxrbP28704 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.97□□□□□ -0.33
RxrbP28704 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.97□□□□□ -0.33
RxrbP28704 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.97□□□□□ -0.33
RxrbP28704 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
RxrbP28704 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.97□□□□□ -0.33
RxrbP28704 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.97□□□□□ -0.33
RxrbP28704 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.97□□□□□ -0.33
RxrbP28704 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RxrbP28704 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.97□□□□□ -0.33
RxrbP28704 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.97□□□□□ -0.33
RxrbP28704 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
RxrbP28704 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RxrbP28704 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RxrbP28704 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RxrbP28704 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.96□□□□□ -0.33
RxrbP28704 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RxrbP28704 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RxrbP28704 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RxrbP28704 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RxrbP28704 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.96□□□□□ -0.33
RxrbP28704 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.96□□□□□ -0.33
RxrbP28704 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RxrbP28704 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RxrbP28704 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RxrbP28704 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RxrbP28704 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RxrbP28704 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RxrbP28704 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RxrbP28704 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
RxrbP28704 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.96□□□□□ -0.33
RxrbP28704 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.96□□□□□ -0.33
RxrbP28704 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RxrbP28704 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RxrbP28704 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RxrbP28704 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.96□□□□□ -0.33
RxrbP28704 Gm8227-201ENSMUST00000223306 571 ntBASIC12.96□□□□□ -0.33
RxrbP28704 Gm26035-201ENSMUST00000083065 308 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms