Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Gm8099-201ENSMUST00000200510 742 ntBASIC12.88□□□□□ -0.35
Nckap1P28660 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.88□□□□□ -0.35
Nckap1P28660 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.88□□□□□ -0.35
Nckap1P28660 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.88□□□□□ -0.35
Nckap1P28660 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.88□□□□□ -0.35
Nckap1P28660 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.88□□□□□ -0.35
Nckap1P28660 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.88□□□□□ -0.35
Nckap1P28660 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.88□□□□□ -0.35
Nckap1P28660 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nckap1P28660 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.88□□□□□ -0.35
Nckap1P28660 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nckap1P28660 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nckap1P28660 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.88□□□□□ -0.35
Nckap1P28660 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Nckap1P28660 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.88□□□□□ -0.35
Nckap1P28660 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nckap1P28660 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.87□□□□□ -0.35
Nckap1P28660 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.87□□□□□ -0.35
Nckap1P28660 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Gm24255-201ENSMUST00000104481 128 ntBASIC12.87□□□□□ -0.35
Nckap1P28660 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.87□□□□□ -0.35
Nckap1P28660 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.87□□□□□ -0.35
Nckap1P28660 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.87□□□□□ -0.35
Nckap1P28660 Gm25668-201ENSMUST00000157700 129 ntBASIC12.87□□□□□ -0.35
Nckap1P28660 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.87□□□□□ -0.35
Nckap1P28660 Gm38241-201ENSMUST00000192641 898 ntBASIC12.87□□□□□ -0.35
Nckap1P28660 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nckap1P28660 Gm21769-201ENSMUST00000211922 111 ntBASIC12.87□□□□□ -0.35
Nckap1P28660 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nckap1P28660 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Nckap1P28660 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nckap1P28660 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nckap1P28660 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nckap1P28660 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nckap1P28660 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.86□□□□□ -0.35
Nckap1P28660 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nckap1P28660 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nckap1P28660 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nckap1P28660 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nckap1P28660 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nckap1P28660 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nckap1P28660 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.86□□□□□ -0.35
Nckap1P28660 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nckap1P28660 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nckap1P28660 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.86□□□□□ -0.35
Nckap1P28660 Gm11964-201ENSMUST00000120982 444 ntBASIC12.86□□□□□ -0.35
Nckap1P28660 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.86□□□□□ -0.35
Nckap1P28660 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.86□□□□□ -0.35
Nckap1P28660 Gm26956-201ENSMUST00000182176 986 ntBASIC12.86□□□□□ -0.35
Nckap1P28660 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.86□□□□□ -0.35
Nckap1P28660 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nckap1P28660 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.86□□□□□ -0.35
Nckap1P28660 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.86□□□□□ -0.35
Nckap1P28660 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nckap1P28660 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nckap1P28660 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nckap1P28660 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nckap1P28660 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.86□□□□□ -0.35
Nckap1P28660 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.86□□□□□ -0.35
Nckap1P28660 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nckap1P28660 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nckap1P28660 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nckap1P28660 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms