Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pde6bP23440 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.14□□□□□ -0.15
Pde6bP23440 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.14□□□□□ -0.15
Pde6bP23440 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Pde6bP23440 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.14□□□□□ -0.15
Pde6bP23440 Gm6458-201ENSMUST00000211573 635 ntBASIC14.14□□□□□ -0.15
Pde6bP23440 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.14□□□□□ -0.15
Pde6bP23440 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pde6bP23440 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Pde6bP23440 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6bP23440 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Pde6bP23440 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.13□□□□□ -0.15
Pde6bP23440 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6bP23440 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6bP23440 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6bP23440 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6bP23440 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6bP23440 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pde6bP23440 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6bP23440 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pde6bP23440 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6bP23440 Gm24255-201ENSMUST00000104481 128 ntBASIC14.13□□□□□ -0.15
Pde6bP23440 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6bP23440 Gm15808-201ENSMUST00000119046 604 ntBASIC14.13□□□□□ -0.15
Pde6bP23440 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.13□□□□□ -0.15
Pde6bP23440 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6bP23440 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.13□□□□□ -0.15
Pde6bP23440 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.13□□□□□ -0.15
Pde6bP23440 Gm5781-201ENSMUST00000219792 443 ntBASIC14.13□□□□□ -0.15
Pde6bP23440 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.13□□□□□ -0.15
Pde6bP23440 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pde6bP23440 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pde6bP23440 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6bP23440 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6bP23440 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6bP23440 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.13□□□□□ -0.15
Pde6bP23440 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6bP23440 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6bP23440 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6bP23440 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Pde6bP23440 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pde6bP23440 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.12□□□□□ -0.15
Pde6bP23440 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.12□□□□□ -0.15
Pde6bP23440 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Pde6bP23440 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.12□□□□□ -0.15
Pde6bP23440 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.12□□□□□ -0.15
Pde6bP23440 Gm37259-201ENSMUST00000193903 849 ntBASIC14.12□□□□□ -0.15
Pde6bP23440 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.12□□□□□ -0.15
Pde6bP23440 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.12□□□□□ -0.15
Pde6bP23440 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.12□□□□□ -0.15
Pde6bP23440 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.12□□□□□ -0.15
Pde6bP23440 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pde6bP23440 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6bP23440 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 Gm22323-201ENSMUST00000103832 109 ntBASIC14.11□□□□□ -0.15
Pde6bP23440 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pde6bP23440 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.11□□□□□ -0.15
Pde6bP23440 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms