Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm10752-201ENSMUST00000218348 729 ntBASIC14.94□□□□□ -0.02
Col1a1P11087 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.94□□□□□ -0.02
Col1a1P11087 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col1a1P11087 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col1a1P11087 Gm21811-201ENSMUST00000096485 930 ntBASIC14.94□□□□□ -0.02
Col1a1P11087 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col1a1P11087 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.94□□□□□ -0.02
Col1a1P11087 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col1a1P11087 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col1a1P11087 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col1a1P11087 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col1a1P11087 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col1a1P11087 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Col1a1P11087 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.93□□□□□ -0.02
Col1a1P11087 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Col1a1P11087 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Col1a1P11087 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col1a1P11087 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.93□□□□□ -0.02
Col1a1P11087 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Col1a1P11087 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.93□□□□□ -0.02
Col1a1P11087 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.93□□□□□ -0.02
Col1a1P11087 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Gm7600-201ENSMUST00000209657 785 ntBASIC14.93□□□□□ -0.02
Col1a1P11087 Gm17827-201ENSMUST00000211825 742 ntBASIC14.93□□□□□ -0.02
Col1a1P11087 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.93□□□□□ -0.02
Col1a1P11087 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.93□□□□□ -0.02
Col1a1P11087 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col1a1P11087 Gm9996-201ENSMUST00000070359 913 ntBASIC14.93□□□□□ -0.02
Col1a1P11087 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col1a1P11087 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.93□□□□□ -0.02
Col1a1P11087 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.93□□□□□ -0.02
Col1a1P11087 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.93□□□□□ -0.02
Col1a1P11087 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.93□□□□□ -0.02
Col1a1P11087 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col1a1P11087 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col1a1P11087 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.92□□□□□ -0.02
Col1a1P11087 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.92□□□□□ -0.02
Col1a1P11087 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Col1a1P11087 Gm7851-201ENSMUST00000117574 323 ntBASIC14.92□□□□□ -0.02
Col1a1P11087 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Col1a1P11087 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.92□□□□□ -0.02
Col1a1P11087 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.92□□□□□ -0.02
Col1a1P11087 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.92□□□□□ -0.02
Col1a1P11087 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.92□□□□□ -0.02
Col1a1P11087 Gm270-201ENSMUST00000223010 976 ntBASIC14.92□□□□□ -0.02
Col1a1P11087 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.92□□□□□ -0.02
Col1a1P11087 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col1a1P11087 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col1a1P11087 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col1a1P11087 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col1a1P11087 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col1a1P11087 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col1a1P11087 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col1a1P11087 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms