Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm37795-201ENSMUST00000194216 2459 ntBASIC19.16■□□□□ 0.66
NclP09405 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NclP09405 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NclP09405 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NclP09405 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NclP09405 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NclP09405 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NclP09405 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NclP09405 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NclP09405 AC139054.1-201ENSMUST00000226898 1598 ntBASIC19.15■□□□□ 0.66
NclP09405 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NclP09405 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NclP09405 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NclP09405 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NclP09405 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NclP09405 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NclP09405 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NclP09405 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NclP09405 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC19.15■□□□□ 0.66
NclP09405 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC19.15■□□□□ 0.66
NclP09405 Gm11222-201ENSMUST00000119005 738 ntBASIC19.15■□□□□ 0.66
NclP09405 Gm11964-201ENSMUST00000120982 444 ntBASIC19.15■□□□□ 0.66
NclP09405 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC19.15■□□□□ 0.66
NclP09405 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC19.15■□□□□ 0.66
NclP09405 Gm27320-201ENSMUST00000184892 109 ntBASIC19.15■□□□□ 0.66
NclP09405 Gm38241-201ENSMUST00000192641 898 ntBASIC19.15■□□□□ 0.66
NclP09405 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC19.15■□□□□ 0.66
NclP09405 CT025533.2-201ENSMUST00000228715 1248 ntBASIC19.15■□□□□ 0.66
NclP09405 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NclP09405 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NclP09405 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NclP09405 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NclP09405 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NclP09405 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC19.15■□□□□ 0.66
NclP09405 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NclP09405 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NclP09405 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NclP09405 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NclP09405 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC19.15■□□□□ 0.66
NclP09405 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NclP09405 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
NclP09405 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC19.14■□□□□ 0.66
NclP09405 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NclP09405 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC19.14■□□□□ 0.65
NclP09405 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NclP09405 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC19.14■□□□□ 0.65
NclP09405 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NclP09405 Gm23363-201ENSMUST00000175024 79 ntBASIC19.14■□□□□ 0.65
NclP09405 Gm4857-201ENSMUST00000192718 785 ntBASIC19.14■□□□□ 0.65
NclP09405 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NclP09405 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC19.14■□□□□ 0.65
NclP09405 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC19.14■□□□□ 0.65
NclP09405 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC19.14■□□□□ 0.65
NclP09405 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NclP09405 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NclP09405 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
NclP09405 Gm8228-201ENSMUST00000189949 2192 ntBASIC19.14■□□□□ 0.65
NclP09405 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NclP09405 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NclP09405 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NclP09405 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NclP09405 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NclP09405 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NclP09405 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC19.13■□□□□ 0.65
NclP09405 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Gm5989-201ENSMUST00000096092 2077 ntBASIC19.13■□□□□ 0.65
NclP09405 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NclP09405 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NclP09405 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NclP09405 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC19.13■□□□□ 0.65
NclP09405 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NclP09405 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC19.13■□□□□ 0.65
NclP09405 Gm5904-201ENSMUST00000210286 865 ntBASIC19.13■□□□□ 0.65
NclP09405 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC19.13■□□□□ 0.65
NclP09405 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NclP09405 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NclP09405 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
NclP09405 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NclP09405 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NclP09405 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms