Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.06□□□□□ -0.48
Sod1P08228 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Sod1P08228 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.06□□□□□ -0.48
Sod1P08228 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Sod1P08228 Gm14644-201ENSMUST00000116671 647 ntBASIC12.06□□□□□ -0.48
Sod1P08228 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.06□□□□□ -0.48
Sod1P08228 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.06□□□□□ -0.48
Sod1P08228 Gm27552-201ENSMUST00000183351 62 ntBASIC12.06□□□□□ -0.48
Sod1P08228 Gm27844-201ENSMUST00000183613 62 ntBASIC12.06□□□□□ -0.48
Sod1P08228 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.06□□□□□ -0.48
Sod1P08228 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Gm43947-201ENSMUST00000203019 959 ntBASIC12.06□□□□□ -0.48
Sod1P08228 Gm19187-201ENSMUST00000206781 892 ntBASIC12.06□□□□□ -0.48
Sod1P08228 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.06□□□□□ -0.48
Sod1P08228 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.06□□□□□ -0.48
Sod1P08228 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sod1P08228 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Sod1P08228 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.06□□□□□ -0.48
Sod1P08228 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sod1P08228 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sod1P08228 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Sod1P08228 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sod1P08228 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Sod1P08228 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.05□□□□□ -0.48
Sod1P08228 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sod1P08228 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.05□□□□□ -0.48
Sod1P08228 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Sod1P08228 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
Sod1P08228 Gm14263-201ENSMUST00000117955 746 ntBASIC12.05□□□□□ -0.48
Sod1P08228 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.05□□□□□ -0.48
Sod1P08228 Gm42937-201ENSMUST00000197360 752 ntBASIC12.05□□□□□ -0.48
Sod1P08228 Gm42997-202ENSMUST00000200321 985 ntBASIC12.05□□□□□ -0.48
Sod1P08228 Gm17812-201ENSMUST00000204935 318 ntBASIC12.05□□□□□ -0.48
Sod1P08228 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.05□□□□□ -0.48
Sod1P08228 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.05□□□□□ -0.48
Sod1P08228 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sod1P08228 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sod1P08228 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sod1P08228 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sod1P08228 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sod1P08228 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.04□□□□□ -0.48
Sod1P08228 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sod1P08228 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.04□□□□□ -0.48
Sod1P08228 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms